Home :: List of Combined Assemblies

Combined AssemblyPhylumClassFamilyGenusSpeciesStrainSamplesPCR
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Acanthoeca_like-sp-10trSarcomastigophoraZoomastigophoraAcanthoecidaeAcanthoeca-likesp.10tr MMETSP0106, MMETSP0105No
Alexandrium-fundyense-CCMP1719DinophytaDinophyceaeGoniodomataceaeAlexandriumfundyenseCCMP1719 MMETSP0196, MMETSP0347Yes
Alexandrium-monilatum-CCMP3105DinophytaDinophyceaeGoniodomataceaeAlexandriummonilatumCCMP3105 MMETSP0096, MMETSP0095, MMETSP0093, MMETSP0097No
Alexandrium-temarense-CCMP1771DinophytaDinophyceaeGoniodomataceaeAlexandriumtamarenseCCMP1771 MMETSP0378, MMETSP0380, MMETSP0384, MMETSP0382No
Amphidinium-carterae-CCMP1314DinophytaDinophyceaeGymnodiniaceaeAmphidiniumcarteraeCCMP1314 MMETSP0258, MMETSP0398, MMETSP0259Yes
Amphiprora-spBacillariophytaBacillariophyceaeAmphipleuraceaeAmphiprorasp.CCMP467 MMETSP0724, MMETSP0725, MMETSP0726, MMETSP0727No
Amphora-coffeaeformis-CCMP127BacillariophytaBacillariophyceaeCatenulaceaeAmphoracoffeaeformisCCMP127 MMETSP0316, MMETSP0318, MMETSP0317No
Aplanochytrium-sp-PBS07LabyrinthistaLabyrinthuleaThraustochytriaceaeAplanochytriumspPBS07 MMETSP0954, MMETSP0955, MMETSP0956, MMETSP0957No
Aplanochytrium-stocchinoi-GSBS06LabyrinthistaLabyrinthuleaThraustochytriaceaeAplanochytriumstocchinoiGSBS06 MMETSP1346, MMETSP1347, MMETSP1348, MMETSP1349No
Asterionellopsis-glacialis-CCMP134BacillariophytaFragilariophyceaeFragilariaceaeAsterionellopsisglacialisCCMP134 MMETSP0705, MMETSP0708, MMETSP0707, MMETSP0706No
Aurantiochytrium-limacinum-ATCCMYA1381LabyrinthistaLabyrinthuleaThraustochytriidaeAurantiochytriumlimacinumATCCMYA-1381 MMETSP0961, MMETSP0958, MMETSP0960, MMETSP0959No
Aureococcus-anophagefferens-CCMP1850OchrophytaPelagophyceaePelagomonodaceaeAureococcusanophagefferensCCMP1850 MMETSP0916, MMETSP0914, MMETSP0917, MMETSP0915No
Aureoumbra-lagunensis-CCMP1510OchrophytaPelagophyceaeSarcionochrysidaceaeAureoumbralagunensisCCMP1510 MMETSP0893, MMETSP0892, MMETSP0891, MMETSP0890No
Azadinium-spinosum-3D9DinophytaDinophyceaeUnknownAzadiniumspinosum3D9 MMETSP1036, MMETSP1037, MMETSP1038No
Ceratium-fusus-PA161109DinophytaDinophyceaeCeratiaceaeCeratiumfususPA161109 MMETSP1075, MMETSP1074No
Chaetoceros-affinis-CCMP159BacillariophytaCoscinodiscophyceaeChaetocerotaceaeChaetocerosaffinisCCMP159 MMETSP0090, MMETSP0088, MMETSP0091, MMETSP0092No
Chaetoceros-curvisetusBacillariophytaCoscinodiscophyceaeChaetocerotaceaeChaetoceroscurvisetusUnknown MMETSP0719, MMETSP0716, MMETSP0718, MMETSP0717No
Chaetoceros-debilis-MM31A_1BacillariophytaCoscinodiscophyceaeChaetocerotaceaeChaetocerosdebilisMM31A-1 MMETSP0150, MMETSP0149No
Chaetoceros-neogracile-CCMP1317BacillariophytaCoscinodiscophyceaeChaetocerotaceaeChaetocerosneogracileCCMP1317 MMETSP0754, MMETSP0752, MMETSP0751, MMETSP0753No
Chattonella-subsalsa-CCMP2191OchrophytaRaphidophyceaeChattonellaceaeChattonellasubsalsaCCMP2191 MMETSP0947, MMETSP0948, MMETSP0950, MMETSP0949No
Chrysochromulina-polylepis-CCMP1757HaptophytaPrymnesiophyceaePrymnesiaceaeChrysochromulinapolylepisCCMP1757 MMETSP0146, MMETSP0147, MMETSP0143, MMETSP0145No
Corethron-pennatum-L29A3BacillariophytaCoscinodiscophyceaeCorethraceaeCorethronpennatumL29A3 MMETSP0171, MMETSP0169No
Crypthecodinium-cohnii-SeligoDinophytaDinophyceaeCrypthecodiniaceaCrypthecodiniumcohniiSeligo MMETSP0325, MMETSP0326, MMETSP0324, MMETSP0323No
Debaryomyces-hansenii-J26AscomycotaSaccharomycetesSaccharomycetaceaeDebaryomyceshanseniiJ26 MMETSP0235, MMETSP0232, MMETSP0234, MMETSP0233No
Dinobryon-sp-UTEXLB2267OchrophytaSynurophyceaeDinobryaceaeDinobryonsp.UTEXLB2267 MMETSP0019, MMETSP0020, MMETSP0812No
Ditylum-brightwellii-GSO103BacillariophytaCoscinodiscophyceaeLithodesmiaceaeDitylumbrightwelliiGSO103 MMETSP1002, MMETSP1005No
Ditylum-brightwellii-GSO104BacillariophytaCoscinodiscophyceaeLithodesmiaceaeDitylumbrightwelliiGSO104 MMETSP1010, MMETSP1013, MMETSP1012No
Ditylum-brightwellii-GSO105BacillariophytaCoscinodiscophyceaeLithodesmiaceaeDitylumbrightwelliiGSO105 MMETSP0998, MMETSP1001No
Dunaliella-tertiolecta-CCMP1320ChlorophytaChlorophyceaeDunaliellaceaeDunaliellatertiolectaCCMP1320 MMETSP1126, MMETSP1128, MMETSP1127No
Durinskia-baltica-CSIRO_CS-38DinophytaDinophyceaePeridiniaceaeDurinskiabalticaCSIRO CS-38 MMETSP0117, MMETSP0116No
Emiliania-huxleyi-374HaptophytaPrymnesiophyceaeNoelaerhabdaceaeEmilianiahuxleyi374 MMETSP1007, MMETSP1009, MMETSP1006, MMETSP1008No
Emiliania-huxleyi-379HaptophytaPrymnesiophyceaeNoelaerhabdaceaeEmilianiahuxleyi379 MMETSP0994, MMETSP0996, MMETSP0997, MMETSP0995No
Emiliania-huxleyi-CCMP370HaptophytaPrymnesiophyceaeNoelaerhabdaceaeEmilianiahuxleyiCCMP370 MMETSP1155, MMETSP1154, MMETSP1156, MMETSP1157No
Emiliania-huxleyi-PLYM219HaptophytaPrymnesiophyceaeNoelaerhabdaceaeEmilianiahuxleyiPLY M219 MMETSP1153, MMETSP1151, MMETSP1152, MMETSP1150No
Euplotes-focardii-TN1CiliophoraSpirotricheaEuplotidaeEuplotesfocardiiTN1 MMETSP0205, MMETSP0206No
Eutreptiella-gymnastica_like-CCMP1594EuglenozoaEuglenidaEutreptiaceaeEutreptiellagymnastica-likeCCMP1594 MMETSP0810, MMETSP0809, MMETSP0811No
Extubocellulus-spinifer-CCMP396BacillariophytaCoscinodiscophyceaeCymatosiraceaeExtubocellulusspiniferCCMP396 MMETSP0699, MMETSP0697, MMETSP0698, MMETSP0696No
Favella_taraikaensis_FeNarragansettBayCiliophoraSpirotricheaPtychocylididaeFavellataraikaensisFe Narragansett Bay MMETSP0436, MMETSP0434No
Fragilariopsis-kerguelensis-L26_C5BacillariophytaBacillariophyceaeBacillariaceaeFragilariopsiskerguelensisL26-C5 MMETSP0734, MMETSP0735, MMETSP0736, MMETSP0733No
Fragilariopsis-kerguelensis-L2_C3BacillariophytaBacillariophyceaeBacillariaceaeFragilariopsiskerguelensisL2-C3 MMETSP0906, MMETSP0909, MMETSP0907, MMETSP0908No
Gephyrocapsa-oceanica-RCC1303HaptophytaPrymnesiophyceaeNoelaerhabdaceae GephyrocapsaoceanicaRCC1303 MMETSP1366, MMETSP1363, MMETSP1364, MMETSP1365No
Glenodinium-foliaceum-CCAP1116_3DinophytaDinophyceaePeridiniaceaeGlenodiniumfoliaceumCCAP 1116/3 MMETSP0118, MMETSP0119No
Gloeochaete-witrockiana-SAG46_84GlaucophytaGlaucophyceaeGloeochaetaceaeGloeochaetewittrockianaSAG46.84 MMETSP0308, MMETSP1089No
Goniomonas-pacifica-CCMP1869CryptophytaCryptophyceaeGoniomonodaceaeGoniomonasPacificaCCMP1869 MMETSP0108, MMETSP0107No
Heterosigma-akashiwo-CCMP2393OchrophytaRaphidophyceaeChattonellaceaeHeterosigmaakashiwoCCMP2393 MMETSP0292, MMETSP0294, MMETSP0295, MMETSP0296No
Heterosigma-akashiwo-CCMP3107OchrophytaRaphidophyceaeChattonellaceaeHeterosigmaakashiwoCCMP3107 MMETSP0411, MMETSP0409, MMETSP0410No
Heterosigma-akashiwo-CCMP452OchrophytaRaphidophyceaeChattonellaceaeHeterosigmaakashiwoCCMP 452 MMETSP0896, MMETSP0894, MMETSP0897, MMETSP0895No
Heterosigma-akashiwo-NBOchrophytaRaphidophyceaeChattonellaceaeHeterosigmaakashiwoNB MMETSP0414, MMETSP0415, MMETSP0416No
Isochrysis-galbana-CCMP1323HaptophytaPrymnesiophyceaeIsochrysidaceaeIsochrysisgalbanaCCMP1323 MMETSP0944, MMETSP0943, MMETSP0595No
Isochrysis-sp-CCMP1244HaptophytaPrymnesiophyceaeIsochrysidaceaeIsochrysisspCCMP1244 MMETSP1388, MMETSP1090No
Isochrysis-sp-CCMP1324HaptophytaPrymnesiophyceaeIsochrysidaceaeIsochrysissp.CCMP1324 MMETSP1131, MMETSP1132, MMETSP1129, MMETSP1130No
Karenia-brevis-CCMP2229DinophytaDinophyceaeGymnodiniaceaeKareniabrevisCCMP2229 MMETSP0027, MMETSP0031, MMETSP0029, MMETSP0030No
Karenia-brevis-SP1DinophytaDinophyceaeGymnodiniaceaeKareniabrevisSP1 MMETSP0573, MMETSP0574No
Karenia-brevis-SP3DinophytaDinophyceaeGymnodiniaceaeKareniabrevisSP3 MMETSP0528, MMETSP0527No
Karenia-brevis-WilsonDinophytaDinophyceaeGymnodiniaceaeKareniabrevisWilson MMETSP0202, MMETSP0201, MMETSP0648, MMETSP0649No
Karlodinium-micrum-CCMP2283DinophytaDinophyceaeGymnodiniaceaeKarlodiniummicrumCCMP2283 MMETSP1016, MMETSP1015, MMETSP1017No
Kryptoperidinium-foliaceum-CCMP1326DinophytaDinophyceaePeridiniaceaeKryptoperidiniumfoliaceumCCMP 1326 MMETSP0120, MMETSP0121No
Lingulodinium-polyedra-CCMP1738DinophytaDinophyceaeGonyaulacaceaeLingulodiniumpolyedraCCMP 1738 MMETSP1034, MMETSP1032, MMETSP1035, MMETSP1033No
Lotharella-globosa-CCCM811CercozoaChlorarachniophyceaeChlorarachniaceaeLotharellaglobosaCCCM811 MMETSP0112, MMETSP0111No
Micromonas-sp-CCMP2099ChlorophytaPrasinophyceaeMamiellaceaeMicromonassp.CCMP2099 MMETSP0802, MMETSP1390No
Micromonas-sp-NEPCC29ChlorophytaPrasinophyceaeMamiellaceaeMicromonassp.NEPCC29 MMETSP1082, MMETSP1386No
Micromonas-sp-RCC472ChlorophytaPrasinophyceaeMamiellaceaeMicromonassp.RCC472 MMETSP1084, MMETSP1387No
Nitzschia-punctata-CCMP561BacillariophytaBacillariophyceaeBacillariaceaeNitzschiapunctataCCMP561 MMETSP0746, MMETSP0744, MMETSP0745, MMETSP0747No
Ochromonas-sp-CCMP1393OchrophytaSynurophyceaeOchromonadaceaeOchromonassp.CCMP1393 MMETSP0005, MMETSP0004No
Oxyrrhis-marinaDinophytaDinophyceaeOxyrrhinaceaeOxyrrhismarinaUnknown MMETSP0471, MMETSP0469, MMETSP0470, MMETSP0468No
Oxyrrhis-marina-CCMP1795DinophytaDinophyceaeOxyrrhinaceaeOxyrrhismarinaCCMP1795 MMETSP0451Yes
Oxyrrhis-marina-LB1974DinophytaDinophyceaeOxyrrhinaceaeOxyrrhismarinaLB1974 MMETSP1426, MMETSP1424, MMETSP1425No
Paraphysomonas-imperforata-PA2OchrophytaChrysophyceaeSynuraceaeParaphysomonasImperforataPA2 MMETSP0104, MMETSP0103No
Pavlova-sp-CCMP459HaptophytaPavlovophyceaePavlovaceae Pavlovasp.CCMP459 MMETSP1139, MMETSP1381, MMETSP1140No
Pelagococcus-subviridis-CCMP1429OchrophytaPelagophyceaePelagomonodaceaePelagococcussubviridisCCMP1429 MMETSP0883, MMETSP0885, MMETSP0884, MMETSP0882No
Pelagomonas-calceolata-CCMP1756OchrophytaPelagophyceaePelagomonodaceaePelagomonascalceolata CCMP1756 MMETSP0888, MMETSP0887, MMETSP0889, MMETSP0886No
Peridinium-aciculiferum-PAER_2DinophytaDinophyceaePeridiniaceaePeridiniumaciculiferumPAER-2 MMETSP0370, MMETSP0371No
Perkinsus-chesapeaki-ATCC_PRA_65PerkinsozoaPerkinseaPerkinsidaePerkinsuschesapeakiATCC PRA-65 MMETSP0924Yes
Perkinsus-marinus-ATCC50439PerkinsozoaPerkinseaPerkinsidaePerkinsusmarinusATCC 50439 MMETSP0922Yes
Picocystis-salinarum-CCMP1897ChlorophytaUnknownUnknownPicocystissalinarumCCMP1897 MMETSP0807, MMETSP1159No
Pleurochrysis-carterae-CCMP645HaptophytaPrymnesiophyceaePleurochrysidaceae PleurochrysiscarteraeCCMP645 MMETSP1137, MMETSP1136, MMETSP1138No
Proboscia-alata-PI_D3BacillariophytaCoscinodiscophyceaeRhizosoleniaceaeProbosciaalataPI-D3 MMETSP0174, MMETSP0176No
Prorocentrum-minimum-CCMP1329DinophytaDinophyceaeProrocentraceaeProrocentrumminimumCCMP1329 MMETSP0053, MMETSP0055, MMETSP0057, MMETSP0056No
Prorocentrum-minimum-CCMP2233DinophytaDinophyceaeProrocentraceaeProrocentrumminimumCCMP2233 MMETSP0269, MMETSP0267, MMETSP0268No
Prymnesium-parvum-Texoma1HaptophytaPrymnesiophyceaePrymenesiaceaePrymnesiumparvumTexoma1 MMETSP1083, MMETSP0008, MMETSP0006, MMETSP0815, MMETSP0814, MMETSP0007No
Pseudo_nitzschia-australis-10249_10_ABBacillariophytaBacillariophyceaeBacillariaceaePseudo-nitzschiaaustralis10249 10 AB MMETSP0139, MMETSP0140, MMETSP0141, MMETSP0142No
Pseudo_nitzschia-fradulenta-WWA7BacillariophytaBacillariophyceaeBacillariaceaePseudo-nitzschiafraudulentaWWA7 MMETSP0852, MMETSP0853, MMETSP0850, MMETSP0851No
Pseudopedinella-elastica-CCMP716OchrophytaDictyochophyceaePedinellaceaePseudopedinellaelasticaCCMP716 MMETSP1068, MMETSP1097No
Pteridomonas-danica-PTOchrophytaDictyochophyceaePedinellaceaePteridomonasdanicaPT MMETSP0101, MMETSP0102No
Pyramimonas-parkeae-CCMP726ChlorophytaPrasinophyceaeHalosphaeraceaePyramimonasparkeaeCCMP726 MMETSP0059, MMETSP0058No
Rhodella-maculata-CCMP736RhodophytaRhodellophyceaeRhodellaceaeRhodellamaculataCCMP736 MMETSP0167, MMETSP0314No
Rhodomonas-sp-CCMP768CryptophytaCryptophyceaePyrenomonadaceaeRhodomonassp.CCMP768 MMETSP1091, MMETSP1389No
Schizochytrium-aggregatum-ATCC28209LabyrinthistaLabyrinthuleaThraustochytriaceaeSchizochytriumaggregatumATCC28209 MMETSP0965, MMETSP0963, MMETSP0962, MMETSP0964No
Scrippsiella-hangoei-SHTV5DinophytaDinophyceaePeridiniaceaeScrippsiellaHangoeiSHTV-5 MMETSP0361, MMETSP0359, MMETSP0360No
Scrippsiella-hangoei_like-SHHI_4DinophytaDinophyceaePeridiniaceaeScrippsiellahangoei-likeSHHI-4 MMETSP0368, MMETSP0369, MMETSP0367No
Scrippsiella-trochoidea-CCMP3099DinophytaDinophyceaePeridiniaceaeScrippsiellatrochoideaCCMP3099 MMETSP0272, MMETSP0271, MMETSP0270No
Skeletonema-dohrnii-SkelBBacillariophytaCoscinodiscophyceaeSkeletonemaceaeSkeletonemadohrniiSkelB MMETSP0563, MMETSP0562No
Skeletonema-marinoi-SkelABacillariophytaCoscinodiscophyceaeSkeletonemaceaeSkeletonemamarinoiskelA MMETSP0918, MMETSP0920No
Skeletonema-menzelii-CCMP793BacillariophytaCoscinodiscophyceaeSkeletonemaceaeSkeletonemamenzeliiCCMP793 MMETSP0603, MMETSP0604No
Symbiodinium-kawagutii-CCMP2468DinophytaDinophyceaeSymbiodiniaceaeSymbiodiniumkawagutiiCCMP2468 MMETSP0132Yes
Symbiodinium-sp-C1DinophytaDinophyceaeSymbiodiniaceaeSymbiodiniumsp.C1 MMETSP1367, MMETSP1369No
Symbiodinium-sp-C15DinophytaDinophyceaeSymbiodiniaceaeSymbiodiniumsp.C15 MMETSP1370, MMETSP1371No
Symbiodinium-sp-CCMP2430DinophytaDinophyceaeSymbiodiniaceaeSymbiodiniumsp.CCMP2430 MMETSP1117, MMETSP1115, MMETSP1116No
Symbiodinium-sp-MpDinophytaDinophyceaeSymbiodiniaceaeSymbiodiniumsp.Mp MMETSP1124, MMETSP1123, MMETSP1122, MMETSP1125No
Tetraselmis-striata-LANL1001ChlorophytaPrasinophyceaeChlorodendraceaeTetraselmisstriataLANL1001 MMETSP0818, MMETSP0820, MMETSP0817, MMETSP0819No
Thalassionema-nitzschioides-L26_BBacillariophytaFragilariophyceaeThalassionemataceaeThalassionemanitzschioidesL26-B MMETSP0158, MMETSP0156No
Thalassiosira-antarctica-CCMP982BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosiraantarcticaCCMP982 MMETSP0902, MMETSP0903, MMETSP0905, MMETSP0904No
Thalassiosira-gravida-GMp14c1BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosiragravidaGMp14c1 MMETSP0494, MMETSP0492, MMETSP0493No
Thalassiosira-miniscula-CCMP1093BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosiraminisculaCCMP1093 MMETSP0737, MMETSP0740, MMETSP0738, MMETSP0739No
Thalassiosira-oceanica-CCMP1005BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosiraoceanicaCCMP1005 MMETSP0971, MMETSP0972, MMETSP0970, MMETSP0973No
Thalassiosira-rotula-CCMP3096BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosirarotulaCCMP3096 MMETSP0404, MMETSP0403No
Thalassiosira-rotula-GSO102BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosirarotulaGSO102 MMETSP0910, MMETSP0911, MMETSP0912, MMETSP0913No
Thalassiosira-weissflogii-CCMP1010BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosiraweissflogiiCCMP1010 MMETSP1414, MMETSP1415, MMETSP0900, MMETSP0899, MMETSP0898, MMETSP1411, MMETSP0901, MMETSP1412, MMETSP1413, MMETSP1406, MMETSP1421, MMETSP1407, MMETSP1422, MMETSP1408, MMETSP1409, MMETSP1410, MMETSP1416, MMETSP1417, MMETSP1418, MMETSP1419, MMETSP1405, MMETSP1420No
Thalassiosira-weissflogii-CCMP1336BacillariophytaCoscinodiscophyceaeSkeletonemaceaeThalassiosiraweissflogiiCCMP1336 MMETSP0880, MMETSP0878, MMETSP0879, MMETSP0881No
Thalassiothrix-antarctica-L6_D1BacillariophytaFragilariophyceaeThalassionemataceaeThalassiothrixantarcticaL6-D1 MMETSP0152, MMETSP0154No
Thraustochytrium-sp-LLF1bLabyrinthistaLabyrinthuleaThraustochytriaceaeThraustochytriumsp.LLF1b MMETSP0198, MMETSP0199No
Undescribed-sp-CCMP2097UnknownUnknownUnknownUndescribedUndescribedCCMP2097 MMETSP0975, MMETSP0976, MMETSP0974, MMETSP0977No
Undescribed-sp-CCMP2098UnknownUnknownUnknownUndescribedUndescribedCCMP2098 MMETSP0992, MMETSP0990, MMETSP0993, MMETSP0991No
Undescribed-sp-CCMP2293UnknownUnknownUnknownUndescribedUndescribedCCMP2293 MMETSP0988, MMETSP0987, MMETSP0986, MMETSP0989No
Undescribed-sp-CCMP2436UnknownUnknownUnknownUndescribedUndescribedCCMP 2436 MMETSP0984, MMETSP0982, MMETSP0985, MMETSP0983No
Undescribed-sp-D1UnknownUnknownUnknownUndescribedUndescribedD1 MMETSP0087, MMETSP0086No
Undescribed-sp-isolateNY0313808BC1UnknownUnknownUnknownUnknownUnknownNY0313808BC1 MMETSP0099, MMETSP0100, MMETSP0098No
Undescribed-undescribed-CCMP2298UndescribedUndescribedCCMP2298 MMETSP1144, MMETSP1142, MMETSP1143, MMETSP1141No
Vaucheria-litorea-CCMP2940OchrophytaXanthophyceaeVaucheriaceaeVaucherialitoreaCCMP2940 MMETSP0945, MMETSP0946No