Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Ochromonas sp. CCMP1393
Ochromonas sp. CCMP1393
Downloads:
| Principle Investigator(s) | David Caron |
|---|---|
| External sample ID | OchroDark |
| NCGR Sample ID | MMETSP0005 |
| Sample accession number | CAM_SMPL_002332 |
| Assembly accession number | CAM_ASM_000150 |
| Combined Assembly Name | Ochromonas-sp-CCMP1393 |
| Genus | Ochromonas |
| Species | sp. |
| Strain | CCMP1393 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 420556 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Ochromonas is a mixotrophic flagelate. |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | https://ccmp.bigelow.org/node/1/strain/CCMP1393 |
| Latitude | 38.702 |
| Longitude | -72.3667 |
| Depth (m) | 22.5 |
| Salinity (psu) | 35 |
| Temperature (ºC) | 20.5 |
| Collection date | 11-JUL-80 |
| Sample collection site | Atlantic_Ocean |
| Other collection site info | Oceanus cruise 83 Sta II |
| Sample material (e.g. "seawater," "sediment," etc.) | nylon rope |
| Other environmental metadata available | cells are 4-6 um in length and width |
| Other environmental metadata available | cells are 4-6 um in length and width |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 04-FEB-11 |
| Growth medium | marine media K |
| Modifications to growth medium | plus soil exract |
| Temperature (ºC) | 18 |
| Salinty (psu) | 35 |
| pH | 8 |
| Light (µmol photons / m2 / sec) | 150 |
| Night portion of day:night cycle in hours | 24 |
| Investigation type | Eukaryotes |
| Other experimental metadata available | Chlorophyll - 43.8 ug/L |