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Nitzschia sp. RCC80

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Principle Investigator(s) E. Virginia Armbrust
External sample IDNitzschia sp.
NCGR Sample IDMMETSP0014_2
Sample accession numberCAM_SMPL_002341
Assembly accession numberCAM_ASM_000159
Combined Assembly NameN/A
GenusNitzschia
Speciessp.
StrainRCC80
ClonalUnknown
AxenicNo
Prelim. NCBI Taxon ID2857
18S rRNA
Importance of organism and transcriptomes
Additional citations and references
Environmental Data
Latitude48.43
Longitude3.59
Collection date06-JAN-97
Sample collection siteEnglish Channel
Other collection site infoBritanny Coast
Sample material (e.g. "seawater," "sediment," etc.)Seawater
Filter fraction minimum (μm).8
Filter fraction maximum (μm).8
Volume filtered (L)4
ENVO term for habitat - primary termAcquatic: marine
ENVO term for habitat - secondary termNot Applicable
Other environmental metadata availableno other types of environmental metadata available
Other environmental metadata availableno other types of environmental metadata available
Habitatmarine habitat
CountryFRANCE
Experimental Data
Date of experiment17-OCT-10
Growth mediumK+Si
Temperature (ºC)20
Salinty (psu)21
pH8
Light (µmol photons / m2 / sec)166
Day portion of day:night cycle in hours16
Night portion of day:night cycle in hours8
Nitrate (μmol/L)882
Ammonium (μmol/L)50
Silicate (μmol/L)504
List of amino acids and concentrations, with unitsthiamine, 200 mg; biotin, 10 mL; cyanocobalamin, 1 mL
Trace elements (total) (nmol/L)123.766
CO2 (ppm)447
Investigation typeEukaryotes