Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Nephroselmis pyriformis CCMP717
Nephroselmis pyriformis CCMP717
Downloads:
| Principle Investigator(s) | Alexandra Z. Worden |
|---|---|
| External sample ID | CCMP717 |
| NCGR Sample ID | MMETSP0034_2 |
| Sample accession number | CAM_SMPL_002346 |
| Assembly accession number | CAM_ASM_000164 |
| Combined Assembly Name | N/A |
| Genus | Nephroselmis |
| Species | pyriformis |
| Strain | CCMP717 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 156128 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Representative of prasinophyte clade III |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 29.3833 |
| Longitude | -94.8833 |
| Sample collection site | Gulf of Mexico |
| Other collection site info | Galveston Channel, Texas |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 01-NOV-10 |
| Growth medium | f/2-Si natural sea water (Bay of Fundy) |
| Modifications to growth medium | f/2 for all nutrients except omitted silicate |
| Temperature (ºC) | 21 |
| Salinty (psu) | 35 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36 |
| Trace elements (total) (nmol/L) | 12795 |
| Investigation type | Eukaryotes |