Chroomonas mesostigmatica_cf CCMP1168

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Environmental Data
Principle Investigator(s)	John Archibald
External sample ID	cm1
NCGR Sample ID	MMETSP0047_2
Sample accession number	CAM_SMPL_002374
Assembly accession number	CAM_ASM_000192
Combined Assembly Name	N/A
Genus	Chroomonas
Species	mesostigmatica_cf
Strain	CCMP1168
Clonal	Unknown
Axenic	No
Prelim. NCBI Taxon ID	195065
18S rRNA	TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTTAGTGTAAATAACTCTTATGAAACTGCGAA TGGCTCATTAAATCAGTTATCGTTTATTTGATGGTCTCTTACTACATGGATAACCGTAGTAATTCTAGAG CTAATACATGCACAAAGGCCCGACTCACGGAGGGCTGTATTTATTAGATTCAAAGCCGACCTTGTTTTGG TGATTCATAATAACTTCTCGAAGCACATGCCCTTGCGGTGGTGCTGATTCATTCAAATTTCTGCCCTATC AACTTTCGATGGTAGGATAGAGGCCTACCATGGTTTTAACGGGTGACGGAGAATTAGGGTTCGATTCCGG AGAGGGAGCCTGAGAGACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCCGACT CGGGGAGGTAGTGACAATAAATAACAATACAGGGCTTACAGTCTTGTTATTGGAATGAGAACAATTTAAA CCCCTTAACGAGGATCAATTAGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCTAATAGCG TATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTCGGATGTCGGGGTCGGGAGGACTGTTGGCCTCTGG TCGAACGGTAAGCTCGGCCCTTTTTGCCTGGGGACTCTGTCACACTTAACTGTGGGGCGGATGGACGCAG GCCGTTTACTTTGAAAAAATCAGATCGTTCAAAGAAGGCTTTTGCTCGAATATGTTAGCATGGAATAATG GAATAGGACTTTGGTGCTATTTTGTTGGTTTATGGGACCGAAGTAATGATTAATAGGGACAGTTGGGGCC GTTTATATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGATAAACTTCTGCGAAAGCATTCGGC AAGGATGTTTTCATTGATCAAGAACGAAAGTTAGGGGATCGAAGACGATCAGATACCGTCGTAGTCTTAA CCATAAACTATGCCGACTAGGGATCAGCGGATGTCAATCTACGACTCCGTTGGCACCTTGTGAGAAATCA AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC CAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGAT TGACAGATTGAAAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGAT TTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGTTATGCGAATATTTATTCGTAG CGATACTTCTTAGAGGGACTATTTGTGTTTAATGAATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAATGCAACGAGCTCTACCCTGCACCGAAAGGCC CGGGTAAACTTGTGAAAATTCATCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGGAATT CCTAGTAAGCGTGATTCATCAGATCGCGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCC TACCGATTGAATGGTCCGGTGAAATCTTCGGATTGCTGGCCAGGACTTCGCAAGTTGACCTGGCTGCGAG AAGTTGATTAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCG
Importance of organism and transcriptomes	Chroomonas mesostigmatica CCMP1168 is a cryptophyte alga. Cryptophytes are unusual among secondary plastid-containing algae in that they still possess the nucleus (nucleomorph) and cytoplasm of their algal endosymbionts in a highly reduced and simplified form. Investigating the nuclear genome of these organisms will improve our understanding of secondary endosymbiosis and the integration of their respective hosts and endosymbionts at the genetic, biochemical, and cellular levels. A better understanding of the relationships between cryptophytes and other red algal secondary plastid-bearing organisms will also be possible.
Additional citations and references
Experimental Data
Date of experiment	01-DEC-10
Growth medium	f/2 seawater
Temperature (ºC)	24
Salinty (psu)	35
pH	7
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	883
Phosphate (μmol/L)	36.3
Trace elements (total) (nmol/L)	21100