Home :: List of Publicly Available Datasets :: Chaetoceros affinis CCMP159

Chaetoceros affinis CCMP159

Downloads:


Principle Investigator(s) Sonya Dyhrman, Andrew Juhl
External sample IDCa, -N, modern CO2
NCGR Sample IDMMETSP0090
Sample accession numberCAM_SMPL_003277
Assembly accession numberCAM_ASM_001088
Combined Assembly NameChaetoceros-affinis-CCMP159
GenusChaetoceros
Speciesaffinis
StrainCCMP159
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID426623
18S rRNAN/A
Importance of organism and transcriptomes5S rRNA sequence: TACAACTTTCAGCAATGGATTTCTTGGCTCCTACAACGATGAAGAACGCAGCGAAATGCGATATGTAATA TGAATTGCACGATTTCGGAATCATCAAAATTTTGAACGCACATTGCATTACCGGGAATGTACCTGGTAGT ATGCTTGGTTGAGTGTCCGTGAACCCAACTAGACCTCACAGAGTGTCTGAATATGGTGTTGCTGGAAGAA CATACCCCTAGGGTGTGTATATCCAGCTCCACTGAAGTGAGTGGTCCTGACTTTACTGTCACTGNNNACA ACTTGCGCACTGCCCCCGGGTCTAGNNNNGNGTTACAGTCTCTCTGGTA
Additional citations and references
Environmental Data
Experimental Data
Date of experiment14-OCT-11
Growth mediumL1
Modifications to growth medium16N:1P
Temperature (ºC)18
Salinty (psu)32
pH8.3
Light (µmol photons / m2 / sec)100
Day portion of day:night cycle in hours14
Night portion of day:night cycle in hours10
Nitrate (μmol/L)5
Phosphate (μmol/L)36
Trace elements (total) (nmol/L)1000
CO2 (ppm)400
Pressure (atm)1
Investigation typeEukaryotes