Gymnochlora sp. CCMP2014

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Environmental Data
Principle Investigator(s)	Patrick Keeling
External sample ID	Gymnochlora sp.
NCGR Sample ID	MMETSP0110_2
Sample accession number	CAM_SMPL_002404
Assembly accession number	CAM_ASM_000222
Combined Assembly Name	N/A
Genus	Gymnochlora
Species	sp.
Strain	CCMP2014
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	629695
18S rRNA	TAGTGATATGTTTGTCTTCAAGACTAAGCCATGCATGTCTAAGTATAATCACTTGTACTGAGAAACTGCA GATGGCTCATTAAATCAGAAATAATTTATTTGATGGTGACTTACTACATGGATACCCGTAGTAATTCTAG AGCTAATACATGCGTAGACACCGTTTTCGGTGATATTTATTAGATCCGAACCAGCCCCCTCGGGGTTTTT TGGTGAATCATGATAACTGTTCGAATCGCCAGGCTTTGCCAGGCGATAGTTCATTCAAATTTCTGCCCTA TCAGCTATTGACGGTAGTGTAGTGGACTACCGTGGCTTTAACGGGTGACGGAGAATTAGGGTTCGATTCC GGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCCGA CACGGGGAGGTAGTGACGAGAAATATCATGACTGTGCCCTTTGCGGCAGAGTTTGTGAAATGAGTGTAAT GTAAATGCCTATGCGAGTATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAA TAACGTATATTAATGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATATCTGACAAGAGAGGACGGCCCGCC TTCGGGATGAGCGCTGGAATCTTGCGTCTATCTTTCGGTGGTTGTCGCTTATCCTTTATTGGACGAGTGT TCACTTCCGGATCAGTTACTTTGAATAAAAACGGGTGTTCAACGCAGGCTTATGCCTTGAAGTATGCAGC ATGGAATAGCAACCATAGGACTATAGTGTTCTATTTGTTGGTTCTGGGACCTTAGTAATGATTGATAGGG ACAGTTGGGGGTGCTGCTGTTCCGCGGCCAGAGGTGAAATTCTCAGATTCCCGGAAGAGCAACTTATGCG AAAGCATTCACCAAGGATGTCTTCTTTAATCAAGAACGAAAGTTGGGGGATCGAAGACGATCAGATACCG TCGTAGTCTCAACCATAAACTATGCCGACTAGGGATTGGGGGACGTCGTTTTTTACTGACTTCCTCAGCA CCTCACGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTG ACGGAAGGACACCACCAGAAGTGGAACTTGCGGCTTAATTTGACTCAACACGGGAAAACTTTCCAGGTCC AGACATAGTGAGGATTGACAGATTGAAGATCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTA GTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCGACCTGCTAAATAGTGTCAGTA TACTCTATGTATATTCGATGCTTCTTAGAGGGACTATCGGATCCAAGCCGGTGGAAGTGCGAGGCAATAA CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGTGTTACACTGATGCGTTCATCAAGTTTTTTC CTTGGCTCGAGAGGCCTAGGTAATCTCGAAAGCGCATCGTGCTGGGGATAGATTATTGTAATTTTTAATC TTCAACGAGGAATTTCTAGTAAACGCGAGTCAACAACTCGCATTGATTACGTCCCTGTCCTTTGTACACA CCGCCCGTCGCTACTACCGATTGAATTATTTGGTGAGGTCCACGGATTGTGGTGTCTGGTTTCGGCCCGT CTCCGCGAGAAGTGGAACGAACCTGATGATTTAGAGGAAGTAAAAGTCGTAACAAGGT
Importance of organism and transcriptomes	Chlorarachniophyte species have diversity in their morphology (amoeboid, coccoid, flagellate cells) and life cycles. Some of them possess multiple cell types in the life cycles, but this strain (CCMP2014) have only amoeboid stage. The transcriptome gave us a clue to know relationship between morphological and molecular characters of chlorarachniophytes.
Additional citations and references	DOI: 10.1111/j.1440-1835.1996.tb00036.x
Primary citation for organism's characterization, if available	DOI:10.1111/j.1529-8817.2010.00851.x
Latitude	24.6019
Longitude	64.9177
Depth (m)	100
Collection date	23-FEB-94
Sample collection site	Sargasso Sea
Other collection site info	open ocean
Sample material (e.g. "seawater," "sediment," etc.)	Seawater
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Other
Habitat	marine habitat
Country	BERMUDA
Experimental Data
Date of experiment	26-FEB-11
Growth medium	ESM medium
Temperature (ºC)	20
Salinty (psu)	35
pH	8
Light (µmol photons / m2 / sec)	55
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	1410
Phosphate (μmol/L)	29
Investigation type	Eukaryotes