Goniomonas sp m

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Environmental Data
Principle Investigator(s)	Eunsoo Kim
External sample ID	Goni_M
NCGR Sample ID	MMETSP0114
Sample accession number	CAM_SMPL_002408
Assembly accession number	CAM_ASM_000226
Combined Assembly Name	N/A
Genus	Goniomonas
Species	sp
Strain	m
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	31324
18S rRNA	GTCTCAAAGATTAAGCCATGCATGTCTAAGTGTAAATAAGTCTACACTGTGAAACTGCGAATGGCTCATTAAATC AGTTATCGTTTATTTGATGGTCCCTTACTACATGGATAACCGTAGTAATTCTAGAGCTAATACATGCATCAAGCC CCGACTCACGAAGGGGTGTATTTATTAGATTCAAAGCCAACCCCTGGCAACAGGTGTCCCTTGGTGATTCATAAT AACCTTTCGAACCGCATGGCCTTGCGCTGGCGGTGATTCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGG ATAGAGGCCTACCATGGTTTTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGACGGC TACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCCGATACGGGGAGGTAGTGACAATAAATAACA ATACAGGGCTCTTCGAGTCTTGTAATTGGAATGAGAACAATTTAAATCCCTTAACGAGGATCCATTAGAGGGCAA GTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCTAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAG TTGGATCTTGGGGTCGGGCAGGCTGTCGGCCTCTGGTCGGACGGCTTTCTCGGCCCTTTCTTTCTGGGGACCACG TCACTTTTCACTAAGGGGCGCTGGGGCTCAGATCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTATCG CTTGAATACATTAGCATGGAATAATGGAATAGGACTGCGGTCTTATTTTGTTGGTTTATGGGACCGAAGTAATGA TTAATAGGGATAGTTGGGGCCGTTTATATTCCGTTGTCAGAGGTGAAATTCTTGGATTTACGGAAGATAAACTTC TGCGAAAGCATTCGGCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCGAAGACGATCAGATACCGT CGTAGTCTTAACCATAAACTATGCCGACTAGGGATCAGTGGACGTTGTTTTACGACTCCATTGGCACCTTGTGAG AAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCA CCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGAC AGATTGAAAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGT TAATTCCGTTAACGAACGAGACCTCAGCCTACTAAATAGTCACACGAACCTTTTCGTTCGCGGCCGGCTTCTTAG AGGGACTATTTGTGTTTAACGAATGAAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCG CACGCGCGCTACACTGATGAATTCAACGAGCTCACAACCTTGACCGAAAGGCCCGGGTAAACTCCGAAATTTCAT CGTGATGGGGATAGACTATTGCAATTATTAGTCTTCAACGAGGAATTCCTAGTAAGCGCGATTCATCAGATCGCG TTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATCGAATGATCCGGTGAAATCTTCGGAT TGCTGGCAGTGGCTTCGCAAGTTGCCATTGCTGCGAAAAGTTGATTAAACCTTATCATTTAGAGGAAGGAGAAGT CGTAAACA
Importance of organism and transcriptomes	The proposed Goniomonas strain was isolated from a sandy beach in Prince Edward Island, Canada in July 2010. 18S rRNA gene phylogenies suggest that it is sister to other marine Goniomonas species and represents a novel Goniomonas lineage. This new strain, which is derived from a single cell isolate and reproduces by vegetative cell division, has the shortest 18S rDNA branch relative to all other known Goniomonas species and grows extremely well under laboratory conditions. It is thus highly suitable for genomic, cellular, and physiological studies in the future.
Additional citations and references
Latitude	46.5105
Longitude	-63.4856
Temperature (ºC)	20
Collection date	01-JUL-10
Collection time	11:00 AM
Sample collection site	Atlantic_Ocean
Sample material (e.g. "seawater," "sediment," etc.)	seawater
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Not Applicable
Habitat description	Sandy beach
Habitat	marine habitat
Country	CANADA
Experimental Data
Date of experiment	25-DEC-10
Growth medium	ESM plus SW802
Modifications to growth medium	No modification
Temperature (ºC)	23
Salinty (psu)	35
pH	7.5
Night portion of day:night cycle in hours	24
Nitrate (μmol/L)	705
Phosphate (μmol/L)	14
Trace elements (total) (nmol/L)	68
Investigation type	Eukaryotes