Strombidinopsis acuminatum SPMC142

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Environmental Data
Principle Investigator(s)	Denis Lynn
External sample ID	SPMC 153
NCGR Sample ID	MMETSP0126
Sample accession number	CAM_SMPL_002411
Assembly accession number	CAM_ASM_000229
Combined Assembly Name	N/A
Genus	Strombidinopsis
Species	acuminatum
Strain	SPMC142
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	141414
18S rRNA	ctggttgatc ctgccagtag tcatatgctt gtctcaaaga ctaagccatg catgtctaag tataagtgtt atacagcgaa actgcgaatg gctcattaaa acagttatag tttatttggt aatcgaaatt acatggataa ccgtggtatc ttctagagct aatacatgca ggttagcccg acttctcgga agggctgtat ttattagata acagaccaat attcctcgtg tctattgtgg tgactcatag taactgatcg gatcgcatgg acttgttccg cgataaacca ttcaagtttc tgacccatca gctttcgatg gtagtgtatt ggactaccat ggctttcacg ggtaacggag gattagggtt cgattccgga gagggagcct gagaaacggc taccacatct aaggaaggca gcaggcgcgt aaattaccca atcctgactc agggaggtag tgacaagaaa taacgggtcg gggcatttgc ctcgggattg caatgaatcg aatttacacc ccttaatgag gatcaattgg agggcaagtc tggtgccagc agccgcggta attccagctc caatagcgta tattaaagtt gttgcagtta aaaagctcgt agtttgattt ctggacgggc gctgacaccc gctcgttagt gaggaggagg cgcccgccca tccttctgtt aacgccatcg gcattcattt gctggcggcg ggctcagata ttttaccttg agaaaattag agtgtttcag gcaggcttgc gcctagatac attagcatgg aataatagaa taggactttg gcctcttctg ttggtctgag gggttagagt aatgattaat agggatagtt gggggcatta gtacttaact gctagaggtg aaattctcag atttgttaaa gactaactta tgcgaaagca tttgccaagg atgttttcat taatcaagaa cgaaagttag gggatcaaag acgatcagat accgtcctag tcttaaccat aaactatgcc gactcgggat cgggggcgag cattatccgt cttcggcacc gtatgagaaa tcaaagtctt tgggttctgg ggggagtatg gtcgcaaggc tgaaacttaa aggaattgac ggaagggcac caccaggcgt ggagcttgcg gctcaatttg actcaacacg ggaaaactta ccaggtccag acatagtgag gattgacaga ttgatagctc tttcttgatt ctatgggtgg tggtgcatgg ccgttcttag ttggtggagt gatttgtctg gttaattccg ttaacgaacg agaccttagc ctactaacta gtcgcaccaa gcacgcttgg cgccgacttc ttagagggac tttgcgcttt ttaaacacaa ggaagtttga ggcaataaca ggtctgtgat gcccttagat gtcctgagcc gcacgcgtgc tacactgacg catacagcga gtacacccca gccccgagag gcggctggta atcagcaata tgcgtcgtga tggggataga gctttggaat tctggctctt gaacgaggaa tgcctagtaa gcgcaagtca tcagcttgcg ttgattaagt ccctgccctt tgtacacacc gcccgtcgct cctaccgatt tcgagtggtc cggtgaaccg ttcggaccgt gggcgccctc gtggagcccg tgggaagtcc agtaaaccac atcacttaga ggaaggataa gtcgtaacaa ggtttccgta ggtgaacctg cagaaggatc a
Importance of organism and transcriptomes	###############################################################################################################################################################################################################################################################
Additional citations and references	Jeong, HJ; Kim, JS; Yoo, YD, et al. 2008. Control of the harmful alga Cochlodinium polykrikoides by the naked ciliate Strombidinopsis jeokjo in mesocosm enclosures. Harmful Algae, 7:368-377.
Primary citation for organism's characterization, if available	Kim,Y.O., Kim,S.Y., Lee,W.J., Choi,J.K. 2009. New observations on the choreotrich ciliate Strombidinopsis acuminata Faure-Fremiet 1924, and comparison with Strombidinopsis jeokjo Jeong et al., 2004. J. Eukaryot. Microbiol., 57:48-55.
Latitude	48.608
Longitude	-122.769
Depth (m)	1
Collection date	03-AUG-11
Sample collection site	northern Puget Sound, WA
Sample material (e.g. "seawater," "sediment," etc.)	Seawater
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Other
Habitat description	plankton
Habitat	marine habitat
Country	UNITED STATES
Experimental Data
Date of experiment	13-OCT-11
Growth medium	Ciliate Media (filtered seawater ammended with dilute f/2 trace metals stock.)
Modifications to growth medium	f/2 trace metals stock added to filtered seawater at a concentration of 0.5ml per Liter.
Temperature (ºC)	15
Salinty (psu)	30
pH	8.1
Light (µmol photons / m2 / sec)	10
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	25
Ammonium (μmol/L)	2
Phosphate (μmol/L)	2.1
Silicate (μmol/L)	37
Prey organism, if applicable (genus and species)	Heterocapsa triquetra, Rhodomonas sp. (CCMP 755), Mantoniella squamata, Isochrysis galbana
Investigation type	Eukaryotes