Strombidium inclinatum S3

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Environmental Data
Principle Investigator(s)	Denis Lynn
External sample ID
NCGR Sample ID	MMETSP0208
Sample accession number	CAM_SMPL_002459
Assembly accession number	CAM_ASM_000277
Combined Assembly Name	N/A
Genus	Strombidium
Species	inclinatum
Strain	S3
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	197538
18S rRNA	tagtcatatg cttgtctcaa agactaagcc atgcatgtct aagtataagt attatacagc gaaactgcga atggctcatt aaaacagtta tagtttattt gataatcgaa tttacatgga taaccgtggt aattctagag ctaatacatg ctggacagcc tgacttttgt ggaagggcag tatttattag ataacaagcc aatattcctc tggtctattg tggtgactca tgataactga tcgaatcgca aggcctatgg tcgcgatagt tcattcaagt ttctgcccca tcagctttcg atggtagtgt attggactac catggcgtta acgggtaacg gaggattagg gttcgattcc ggagagggag cctgagaaac ggctaccaca tctaaggaag gcagcaggcg cgtaaattac ccaatcctga ctcagggagg tagtgacaag aaatagcgga ccgagaccat ccggtttcgg gattgcaatg agctaaattt acaccccttt acgaatgtcg attggagggc aagtctggtg ccagcagccg cggtaattcc agctccaata gcgtatatta aagttgttgc agttaaaaag ctcgtagttg gatttctggg agggtgccaa tgtccgctac ggcgtgcgca gcggcgccct tccatccttc tgttaacgct tcacggcatt catttgctgg ttgcgggctc agatatttta ccttgagaaa attagagtgt ttcaggcagg ctaggccgga atacattagc atggaataat ggaacaggac tacggtctct ttgttggttt gagggactgc agtaatgatt aatagggata gttgggggca ttagtattta attgtcagag gtagaattct cagattaatt aaagactgac ctatgcgaaa gcatttgcca aggatgtttt cattaatcaa gaacgaaagt taggggatca aagacgatca gataccgtcg tagtcttaac cataaactat gccgactcgg gatcgggggc gagacctatc cgccttcggc accgtatgag aaatcaaagt ctttgggttc tggggggagt atggtcgcaa ggctgaaact taaaggaatt gacggaaggg caccaccagg cgtggagctt gcggctcaat ttgactcaac acgggaaaac ttaccaggtc cagacatagt aaggattgac agattgatag ctctttcttg attctatggg tggtggtgca tggccgttct tagttggtgg agtgatttgt ctggttaatt ccgttaacga acgagacctt agcctgctaa ctagtcacag cgatcccgat cgttgctggc ttcttagagg gactttgtgg cactaaacac aaggaagttt gaggcaataa caggtctgtg atgcccttag atgtcctggg ccgcacgcgt gctacactga cgcctacagc gagtacttcc cagccccgaa aggcggctgg taatcagcaa taggcgtcgt gatggggata gatctttgga attatggatc ttgaacgagg aatgcctagt aagcgcaggt cattagcctg cgctgattat gtccctgccc tttgtacaca ccgcccgtcg ctcctaccga ttgagtggtc cggtgaactt ttcggactgc gcggagtttc gtgctctgtc gcggaaagtc aagtaaacct tatcacttag aggaaggaga agtcgtaaca aggtttccgt aggt
Importance of organism and transcriptomes	###############################################################################################################################################################################################################################################################
Additional citations and references	Modeo, L., Petroni, G., Bonaldi, M., Rosati, G. (2001). Trichites of Strombidium (Ciliata, Oligotrichida) are extrusomes. J. Eukaryot. Microbiol., 48: 95-101.
Primary citation for organism's characterization, if available	Modeo, L., Petroni, G., Rosati G. Montagnes, D. J. S. 2003. A multidisciplinary approach to describe protists: redescriptions of Novistrombidium testaceum Anigstein, 1914 and Strombidium inclinatum Montagnes, Taylor, and Lynn 1990 (Ciliophora, Oligotrichia). J. Eukaryot. Microbiol. 50:175-189
Latitude	43.3
Longitude	10.2
Salinity (psu)	33
Temperature (ºC)	19
pH	8
Collection date	01-OCT-97
Sample collection site	Ligurian Sea
Other collection site info	Naval Academy, Leghorn (Tuscany)
Sample material (e.g. "seawater," "sediment," etc.)	Seawater and sediment
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Other
Habitat description	50-100 cm diameter, 5-10 cm deep, pools on a rocky shore near Leghorn
Other environmental metadata available	no other types of environmental metadata available
Other environmental metadata available	no other types of environmental metadata available
Habitat	marine habitat
Country	ITALY
Experimental Data
Date of experiment	29-MAY-12
Growth medium	autoclaved artificial seawater (Red Sea Salt, Red Sea, http://www.redseafish.com)
Temperature (ºC)	19
Salinty (psu)	33
pH	8.2
Light (µmol photons / m2 / sec)	300
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Prey organism, if applicable (genus and species)	Dunaliella tertiolecta
Investigation type	Eukaryotes
Other experimental metadata available	Cells treated with 0.1 mg/ml ampicillin overnigth