Litonotus pictus P1

Downloads:

Reads

Annotations

Peptides

Contigs

CDS

Environmental Data
Principle Investigator(s)	Denis Lynn
External sample ID
NCGR Sample ID	MMETSP0209
Sample accession number	CAM_SMPL_002483
Assembly accession number	CAM_ASM_000301
Combined Assembly Name	N/A
Genus	Litonotus
Species	pictus
Strain	P1
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	665100
18S rRNA	TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAATAACTACACAGTAAAACTGCGAATGGCTCATTAAAACAGTTATAGTTTATTTGATAAATTAAATGGATAACTGTAGGAAACTAGAGCTAATACATGCCAAGGTCGTAAGACTGCATTTATTAGATATACCAAGTCGGTGAATCATGATAACTTTGCAAATCGAAACAACGTTTCGATAAATCATTCAAGTTTCTGACCTATCATGCTCTCGATGGTAGTGTATTGGACTACCATGGCAGTCACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAAGGAGCCTGAGAAACGGCTACTACATCTAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCTAAATCAGGGAGGTAGTGACAAGATATAACAACGCGATTAAATATTGCGATTGTAGTGAGGGTATTCTAAAAATAGCTTCGAGTACGATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCAAGAAATGCATCTGGGCAACCAGTTTGCTTTCTACCAGTCATTGACTGTTACTGTGAGAAAATTAGAGTGTTTCAAGCAGGCAATTGCAGGAATACATTAGCATGGAATAACGAATGTGTCTACAATTTGGTTGATTGTAGATTACGATTAATAGGGACAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATTTGTTAAAGACTAACATATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGATAGGGGATCAAAGACGATCAGATACCGTCGTAGTCCTATCTATAAACTATGCCGACTAGGGATTGGTGCGGTGTATACCGTATCAGTACCTTATGAGAAATCAAAGTCTTTGGGTTCTGGGGGGAGTATGGTCGCAAGACTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGATTGATAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGATAACGAACGAGACCTTAACCTGCTAACTAGTCTCGCCTATTTCATAGGTGTAGACTTCTTAGAGGGACTATGTCACGATGAGTGCATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTATATGTCCTGGGCTGCACGCGTGCTACACTGATGCATACAACAAGTTCCTAGCCCGAAAGGGTATGGCAATCTCGAATATGCATCGTGATGGGGATAGATCTTTGCAATTATAGATCTTGAACGAGGAATTCCTAGTAAATGTAAGTCATCATCTTACATTGATTATGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATACCGGGTGATGTGCTGAATCTATTGGACCGAACTTCGGAAAGACAGGTAAAGCTTATCACCTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGT
Importance of organism and transcriptomes	Litonotus sp. represents the class LITOSTOMATEA. Study of Litonotus is also scientifically compelling as this and related species are top predators in many marine benthic food webs, feeding on other ciliates and small flagellates.
Additional citations and references	Kim S-J and Min GS. 2009. Taxonomic study of poorly-known marine pleurostomatid ciliates of Litonotus paracygnus and L. pictus (Ciliophora: Pleurostomatida) from Korea. The Korean Journal of Systematic Zoology, 25: 167-178.
Primary citation for organism's characterization, if available	Modeo, L., Petroni, G., Verni, F., Rosati, G. (2002). The fine structure of the extrusomes of two ciliate predator species. 22? Meeting of the Italian Society of Protozoology (SIP). 20-21 September 2001, La Spezia (Italy). J Eukaryot Microbiol, 49: 13A.
Latitude	40.3
Longitude	17.57
Salinity (psu)	33
Temperature (ºC)	19
pH	8
Collection date	01-APR-00
Sample collection site	Ionian Sea
Other collection site info	Campomarino di Maruggio (Taranto, Puglia)
Sample material (e.g. "seawater," "sediment," etc.)	Seawater and sediment
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Other
Habitat description	50-100 cm diameter, 5-10 cm deep, pools on rocky shore
Other environmental metadata available	no other types of environmental metadata available
Other environmental metadata available	no other types of environmental metadata available
Habitat	marine habitat
Country	ITALY
Experimental Data
Date of experiment	16-FEB-12
Growth medium	autoclaved artificial seawater (Red Sea Salt, Red Sea, http://www.redseafish.com)
Temperature (ºC)	19
Salinty (psu)	33
pH	8.2
Light (µmol photons / m2 / sec)	300
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Prey organism, if applicable (genus and species)	Euplotes crassus
Investigation type	Eukaryotes
Other experimental metadata available	Cells treated with 0.1 mg/ml ampicillin overnigth and then washed in autoclaved seawater