Chrysochromulina polylepis UIO037

Downloads:

Reads

Annotations

Peptides

Contigs

CDS

Environmental Data
Principle Investigator(s)	Bente Edvardsen
External sample ID	Cpol UIO037
NCGR Sample ID	MMETSP0286
Sample accession number	CAM_SMPL_002500
Assembly accession number	CAM_ASM_000318
Combined Assembly Name	N/A
Genus	Chrysochromulina
Species	polylepis
Strain	UIO037
Clonal	Yes
Axenic	Yes
Prelim. NCBI Taxon ID	72548
18S rRNA	AACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAGCGACTTGTACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTTATTTGATGGTACCTTACTACTTGGATACCCGTAGTAATTCTAGAGCTAATACATGCAGGAAGTCCCGACTTYGGAAGGGATGTATTTATTAGATAAGAAACCAACCGGCTTGCCGGTTGCGTGCTGAGTCACAATAACTGCTCGAATCGCATGGCCTTGTGCCGGCGATGGTTCATTCAAATTTCTGCCCTATCAGCTTTCGATGGTAGGATCGAGGCCTACCATGGCGTTTACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTGCCCGAATCCTGACACAGGGAGGTAGTGACAAGAAATAACAATACAGGGCTATTTTAGTCTTGTAATTGGAATGAGTACAATTTACATCTCTTCACGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAACGCTCGTAGTCGGATTTCGGGGCGTGCCCGCCGGTCTGCCGATGGGTATGCACTGGCGGGNGCGTCCTTCCTTCCGGAGACTGGTCCTACTCTTAACTGAGCGGGGTCGGGAGTCGGATCGTTTACTTTGAAAAAATCAGAGTGTTTCAAGCAGGCAGCTCGCTCTTGCATGGATTAGCATGGGATAATGAAATAGGACTTTGGTGCTATTTTGTTGGTTTCGAACACCGAAGTAATGATTAACAGGGACAGTCAGGGGCACTCGTATTCCGCCGAGAGAGGTGAAATTCTCAGACCAGCGGAAGACGAACCACTGCGAAAGCATTTGCCAGGGATGTTTTCACTGATCAAGAACGAAAGTTAGGGGATCGAAGACGATCAGATACCGTCGTAGTCTTAACCATAAACCATGCCGACTAGGGATCGGCGGAAGTCCTTTTTGACTCCGTCGGCACCTTATGGGAAACTATAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATTGTGAGGATTGACAGATTGAGAGCTCTTTCTTGATTCGATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTTAGCCTATTAAATAGTGGCGCGAACACCTTGTTGGCGGTTCACTTCTTAGAGGGACAACTTGTCTTCAACAAGTGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCACTCAACGAGTCTCGCTCGACCGAGAGGTCCGGCAAACCTTTTGAACTTGCATCGTGATGGGGATAGATTATTGCAACTATTAATCTTCAACGAGGAATTCCTAGTAAGCGCATGTCATCAGCGTGCGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGGCCCCCGGACTGTGGCAACGCAGCTGGTTCGCCAGCCGCGATGCCGCGGGAAGCTGTCCAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA
Importance of organism and transcriptomes	C. polylepis is ichthyotoxic and cosmopolitic
Additional citations and references
Latitude	59
Longitude	10.45
Depth (m)	18
Salinity (psu)	25
Temperature (ºC)	16
Collection date	29-MAY-88
Sample collection site	North Sea
Other collection site info	Near Torbj?rnskj?r, monitoring station OF1
Sample material (e.g. "seawater," "sediment," etc.)	seawater
Nirate (μmol/kg)	7
Silicate (μmol/kg)	1
ENVO term for habitat - primary term	Acquatic: marine
Habitat description	coastal water
Other environmental metadata available	Colleced during a toxic bloom with approx. 50 million cells/L
Other environmental metadata available	Colleced during a toxic bloom with approx. 50 million cells/L
Habitat	marine habitat
Country	NORWAY
Experimental Data
Date of experiment	31-MAR-11
Growth medium	IMR 1/2 (Eppley et al 1967)
Modifications to growth medium	added 10 nM Se, without HCl and Si
Temperature (ºC)	16
Salinty (psu)	25
pH	8.2
Light (µmol photons / m2 / sec)	50
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	248
Phosphate (μmol/L)	25
Silicate (μmol/L)	18
Total Fe (nmol/L)	2
DOC (mg/L)	not measssured
Trace elements (total) (nmol/L)	10
Investigation type	Eukaryotes
Other experimental metadata available	Form blooms in brackish Atlantic waters