Home :: List of Publicly Available Datasets :: Amphora coffeaeformis CCMP127
Amphora coffeaeformis CCMP127
Downloads:
Principle Investigator(s) | Peter Stief |
---|---|
External sample ID | Ac-O+N |
NCGR Sample ID | MMETSP0316 |
Sample accession number | CAM_SMPL_002502 |
Assembly accession number | CAM_ASM_000320 |
Combined Assembly Name | Amphora-coffeaeformis-CCMP127 |
Genus | Amphora |
Species | coffeaeformis |
Strain | CCMP127 |
Clonal | Unknown |
Axenic | Yes |
Prelim. NCBI Taxon ID | 265554 |
18S rRNA | |
Importance of organism and transcriptomes | A. coffeaformis is the first phototrophic eukaryote shown to perform dissimilatory nitrate reduction (Kamp et al. 2011, PNAS, doi:10.1073/pnas.1015744108). Transcriptome of anoxic treatment with nitrate. |
Additional citations and references | |
Environmental Data | |
Primary citation for organism's characterization, if available | Agardh C.A. 1827. Aufzahlung einiger in der osterreichischen Landern gefundenen neuen Gattungen und Arten von Algen, nebst ihrer Diagnostik und beigefugten Bemerkungen. Flora 10: 625-640. |
Experimental Data | |
Date of experiment | 15-APR-11 |
Growth medium | f/2 + silicate |
Modifications to growth medium | f/2 + silicate, adjusted to 1 mM nitrate and amended with 200 ?M acetate |
Temperature (ºC) | 15 |
Salinty (psu) | 35 |
pH | 8 |
Night portion of day:night cycle in hours | 24 |
Nitrate (μmol/L) | 1000 |
Phosphate (μmol/L) | 36 |
Silicate (μmol/L) | 106 |
Trace elements (total) (nmol/L) | 1000 |