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Amphora coffeaeformis CCMP127


Principle Investigator(s) Peter Stief
External sample IDAc+L+O+N
NCGR Sample IDMMETSP0318_2
Sample accession numberCAM_SMPL_002506
Assembly accession numberCAM_ASM_000324
Combined Assembly NameAmphora-coffeaeformis-CCMP127
Prelim. NCBI Taxon ID265554
18S rRNA
Importance of organism and transcriptomesA. coffeaformis is the first phototrophic eukaryote shown to perform dissimilatory nitrate reduction (Kamp et al. 2011, PNAS, doi:10.1073/pnas.1015744108). Transcriptome of oxic control in the light and with nitrate.
Additional citations and references
Environmental Data
Primary citation for organism's characterization, if availableAgardh C.A. 1827. Aufzahlung einiger in der osterreichischen Landern gefundenen neuen Gattungen und Arten von Algen, nebst ihrer Diagnostik und beigefugten Bemerkungen. Flora 10: 625-640.
Experimental Data
Date of experiment15-APR-11
Growth mediumf/2 + silicate
Modifications to growth mediumf/2 + silicate, adjusted to 1 mM nitrate
Temperature (ºC)15
Salinty (psu)35
Light (µmol photons / m2 / sec)160
Day portion of day:night cycle in hours14
Night portion of day:night cycle in hours10
Nitrate (μmol/L)1000
Phosphate (μmol/L)36
Silicate (μmol/L)106
Trace elements (total) (nmol/L)1000