Marine Microbial Eukaryote Transcriptome Sequencing Project
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Pseudo-nitzschia delicatissima B596
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| Principle Investigator(s) | Marina Montresor |
|---|---|
| External sample ID | B596 |
| NCGR Sample ID | MMETSP0327 |
| Sample accession number | CAM_SMPL_002531 |
| Assembly accession number | CAM_ASM_000349 |
| Combined Assembly Name | N/A |
| Genus | Pseudo-nitzschia |
| Species | delicatissima |
| Strain | B596 |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 44447 |
| 18S rRNA | |
| Importance of organism and transcriptomes | |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | PMID: 17145201(as strain AL-24, P. delicatissima clade 1) |
| Latitude | 40.8083 |
| Longitude | 14.25 |
| Depth (m) | 2 |
| Salinity (psu) | 37.0423 |
| Temperature (ºC) | 15.2178 |
| Collection date | 30-MAR-10 |
| Sample collection site | Mediterranean Sea |
| Other collection site info | Long Term Ecological Research Station MareChiara (LTER-MC) Gulf of Naples |
| Sample material (e.g. "seawater," "sediment," etc.) | Seawater |
| Chlorophyll (mg/m3) | 2.01 |
| Nirate (μmol/kg) | 4.36 |
| Phosphate (μmol/kg) | 0.044 |
| Dissolved oxygen (ml/L) | 5.58 |
| POC (mg/L) | 0.31 |
| Silicate (μmol/kg) | 4.46 |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat description | coastal waters, surface layer |
| Habitat | marine habitat |
| Country | ITALY |
| Experimental Data | |
| Date of experiment | 28-APR-11 |
| Growth medium | f/2 |
| Temperature (ºC) | 20 |
| Salinty (psu) | 36 |
| pH | .34722222222222227 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 12 |
| Night portion of day:night cycle in hours | 12 |
| Nitrate (μmol/L) | 883 |
| Phosphate (μmol/L) | 36.3 |
| Silicate (μmol/L) | 107 |
| Trace elements (total) (nmol/L) | 24500 |
| Investigation type | Eukaryotes |