Scrippsiella Hangoei SHTV-5

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Environmental Data
Principle Investigator(s)	Karin Rengefors
External sample ID
NCGR Sample ID	MMETSP0360
Sample accession number	CAM_SMPL_002524
Assembly accession number	CAM_ASM_000342
Combined Assembly Name	Scrippsiella-hangoei-SHTV5
Genus	Scrippsiella
Species	Hangoei
Strain	SHTV-5
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	268821
18S rRNA	GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTCAGTA TAAGCTTCTATACGGTGAAACTGCGAATGGCTCATTAAAACAGTTACAGT TTATTTGATGGTCATTCCTTACATGGATAACCGTGGTAATTCTAGAGCTA ATACATGCGCCCAAACCCGACTCCGTGGAAGGGTTGTGTTTATTAGTTAC AGAACCAACCCAGGCTCTGCCTGGTCTTGTGGTGATTCATAATAACCGAA CGAATCGCATGGCATCAGCTGGCGATGAATCATTCAAGTTTCTGACCTAT CAGCTTCCGACGGTAGGGTATTGGCCTACCGTGGCAATGACGGGTAACGG AGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACAT CTAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACAGGGAGGT AGTGACAAGAAATAACAATACAGGGCATCCATGTCTTGTAATTGGAATGA GTAGAATTTAAATCCCTTTATGAGTATCGATTGGAGGGCAAGTCTGGTGC CAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCG GTTAAAAAGCTCGTAGTTGGATTTCTGCCGAGGACGACCGGTCCGCCCAC TGGGTGTGTATCTGGCTCGGCCTGGGCATCTTCTTGGAGAACGTAGCTGC ACTTGATTGTGTGGTGCGGTATCCAGGACTTTTACTTTGAGGAAATTAGA GTGTTTCAAGCAGGCACACGCCTTGAATACATTAGCATGGAATAATAAGA TAGGACCTTGGTTCTATTTTGTTGGTTTCTAGAACTGAGGTAATGATTAA TAGGGATAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTG GATTTGTTAAAGACGGACTACTGCGAAAGCATTTGCCAAGGATGTTTTCA TTGATCAAGAACGAAAGTTAGGGGATCGAAGACGATCAGATACCGTCCTA GTCTTAACCATAAACCATGCCGACTAGAGATTGGAGGTCGTTATCTATAT GACTCCTTCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGA GTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCA GGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGG TCCAGACATAGTAAGGATTGACAGATTGATAGCTCTTTCTTGATTCTATG GGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAA TTCCGTTAACGAACGAGACCTTAACCTGCTAAATAGTTACACTTAACCTC GGTTAAGTGGGCAACTTCTTAGAGGGACTTTGTGTGTCTAACGCAAGGAA GTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCAC GCGCGCTACACTGATGCGCTCAACGAGTTTATGACCTTGCCCGATAGGGT TGGGTAATCTTCTTAAAACGCATCGTGATGGGGATAGATTATTGCAATTA TTAATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGTGCT GATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGA GTGATCCGGTGAATAATTCGGACCGCAGCAGTGTTCAGCTCCTGGACGTT GCAG
Importance of organism and transcriptomes	This dinoflagellate is distinct to the Baltic and has an exceptional salinity tolerance range, covering the entire salinity gradient. It is well suited for salinity adaptation studies and speciation studies. Cold-water species.
Additional citations and references
Primary citation for organism's characterization, if available	Larsen, J., Kuosa, H., Ikavalko, J., Kivi, K. & Hallfors, S. 1995. A redescription of Scrippsiella hangoei (Schiller) comb. nov. ? a `red tide? forming dinoflagellate from the northern Baltic. Phycologia 34(2):135?144
Latitude	59.51
Longitude	23.13
Depth (m)	40
Salinity (psu)	6.5
Collection date	01-JUL-08
Sample collection site	Baltic Sea
Sample material (e.g. "seawater," "sediment," etc.)	Sediment
Habitat description	eutrophic coastal waters
Habitat	sediment
Country	FINLAND
Experimental Data
Date of experiment	15-JUN-11
Growth medium	f/2 amended sea water without silica
Temperature (ºC)	3
Salinty (psu)	3
pH	7
Light (µmol photons / m2 / sec)	20
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	883
Phosphate (μmol/L)	36
Silicate (μmol/L)	100
Trace elements (total) (nmol/L)	20920