Thalassiosira rotula CCMP3096

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Environmental Data
Principle Investigator(s)	Bethany Jenkins
External sample ID	f/2, light cycle
NCGR Sample ID	MMETSP0403
Sample accession number	CAM_SMPL_002553
Assembly accession number	CAM_ASM_000371
Combined Assembly Name	Thalassiosira-rotula-CCMP3096
Genus	Thalassiosira
Species	rotula
Strain	CCMP3096
Clonal	Yes
Axenic	Yes
Prelim. NCBI Taxon ID	49265
18S rRNA	TTGATCCTTCTGCAGGTTCACCTACGGAAACCTTGTTACGACTTCACCTTCCTCTAAATGATAAGGTTCGGACAAGTTCTCGCGGTCAGGCCCCAATGAAGGAGCCAAGCCACAATCCCGAGTCCTCACCGGACCATTCAATCGGTAGGTGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAATCATTGCGGTTTGATGAACCGCGATTACTAGGAATTCCTCGTTCAAGATTAATAATTGCAATAATCTATCCCTATCACGATGCAAGTTAACAAGATTACCCAGGCCTCTCGGCCAAGGTTATATGCTCGTTGAGTGCATCAGTGTAACGCGCGTGCGGCCCAGGACATCAAAGGGCATCACAGACCTGTTATTGCCGCCATCTTCCTTCATCTTGTAGAATGAACGTCCCTCTAAGAAGCTCTTAACCAATCAAAAACGATTAGTAGAACTATTTAGCAGGCGGCGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAACTCTCAATCTGTCAATCCTCACTATGTCTGGACCTGGTAAGTTTTCCCGTGTTGAGTCAAATTAAGCCGCAGGTTCCACTCCTGGTGGTGCCCTTCCGTCAATTTCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATACGGTGCCGAAGGAGTCAAAAAACAACCTCCGATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGATCCCCTAACTTTCGTTCTTGATTAATGAAAACATCCTTGGTAAATGCTTTCGCAGTAGTTCGTCTTTCGGAAATCCAAGAATTTCACCTCTGACAACGAAATACGAATACCCCCCAACTGTCCCTATTAATCATTACTTCGTAACGCAAACCAACAAAATAGTTCCGAAGTCCTATCTTATTATTCCATGCTAATATATTCAACGGCATAAGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAACGATGGGTATCCCCTGCCCGACAACTTAATGCCAAACAGGATCTCCCCAAGGATGGCCAGAGACAACACAAGTTCACGCACAGAGTGCGTGACCGGTCACTCCTGCCAGAAATCCAACTACGAGCTTTTTAACTGCAACAACTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATTGATACTCGATAAGGGATTTAAATTGTTCTCATTCCAATTGCCAGACCTGTAAAGGCCCGGCATTGTTATTTATTGTCACTACCTCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTCTCTCAGGCTCCCTCTCCGAAATCTTGCCCTAACAATTCGTTACCCGTTAAAGCCATGGTAGTCCAATACACTACCATCCAAAGCTGATAGGGCAGAAACTTGAATGATCCATCGCCGGCATGGAGCCATGCGATTCGAAAAGTTATTATGAATCACCAAAGCACCTCCGAAGAGGGTTGGTCTATACCTAATAAATACTACCCTTCCGCGAACAGTTGGGTATTGATGCATGTATTAGCTCTAGAATTACTACGGGTATCCAAGTAGTAAGGGACTATCAAATAAACTATAACTGATATAATGAGCCGTTCGCAGTTTTCAAAGTAAAAGAG
Importance of organism and transcriptomes	###############################################################################################################################################################################################################################################################
Additional citations and references	Guillard, R.R.L. 1975. Culture of phytoplankton for feeding marine invertebrates. pp 26-60. In Smith W.L. and Chanley M.H (Eds.) Culture of Marine Invertebrate Animals. Plenum Press, New York, USA.
Latitude	49.65
Longitude	-127.4338
Temperature (ºC)	8
Collection date	13-MAY-07
Collection time	08:00 PM
Sample collection site	Pacific_Ocean
Sample material (e.g. "seawater," "sediment," etc.)	seawater
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Not Applicable
Habitat description	Coastal waters, Northeast Pacific
Habitat	marine habitat
Country	CANADA
Experimental Data
Date of experiment	11-JUL-11
Growth medium	f/2
Temperature (ºC)	18
Salinty (psu)	35
pH	8.2
Light (µmol photons / m2 / sec)	125
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	882
Phosphate (μmol/L)	36.2
Silicate (μmol/L)	106
Investigation type	Eukaryotes