Marine Microbial Eukaryote Transcriptome Sequencing Project
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Astrosyne radiata 13vi08-1A
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| Principle Investigator(s) | Matt Ashworth |
|---|---|
| External sample ID | ECT3697starry |
| NCGR Sample ID | MMETSP0418 |
| Sample accession number | CAM_SMPL_002578 |
| Assembly accession number | CAM_ASM_000396 |
| Combined Assembly Name | N/A |
| Genus | Astrosyne |
| Species | radiata |
| Strain | 13vi08-1A |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 1158023 |
| 18S rRNA | |
| Importance of organism and transcriptomes | This diatom has a radial valve morphology despite being genetically pennate in its evolutionary history. Like other taxa in its genus, it has a pseudoseptum on the inside of the valve that contains the pyrenoids of the cell's chloroplasts. |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Ashworth et al (in prep) |
| Latitude | 13.4427 |
| Longitude | 144.6428 |
| Collection date | 13-JUN-08 |
| Other collection site info | Gab Gab Beach--"farmer fish" turf |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat description | Collected in the macroalgal turf managed by "farmer" damselfish |
| Habitat | marine habitat |
| Country | GUAM |
| Experimental Data | |
| Growth medium | f/2 enriched seawater |
| Temperature (ºC) | 27 |
| pH | 8.1 |
| Light (µmol photons / m2 / sec) | 61 |
| Day portion of day:night cycle in hours | 13 |
| Night portion of day:night cycle in hours | 11 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 362 |
| Silicate (μmol/L) | 106 |
| Trace elements (total) (nmol/L) | 24571.2 |
| Investigation type | Eukaryotes |