Favella taraikaensis Fe Narragansett Bay

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Environmental Data
Principle Investigator(s)	Susanne Menden-Deuer
External sample ID	Ha3107 + Fe
NCGR Sample ID	MMETSP0434
Sample accession number	CAM_SMPL_002561
Assembly accession number	CAM_ASM_000379
Combined Assembly Name	Favella_taraikaensis_FeNarragansettBay
Genus	Favella
Species	taraikaensis
Strain	Fe Narragansett Bay
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	626734
18S rRNA	CTAGTGATGTGGTTTACTCGACTTTCCAAA AGTACTCGAGGCACTCTCGGTCCAAAGGGTTCACCGGACCACTCGAAATC GGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAATCAACGCA GGCTGATGACCTGCGCTTACTAGGCATTCCTCGTTCAAGATCAAAAATTC CAAAGATCTATCCCCAGCACGACTCATATTGCTGATTACCGGCAGCCTTT CGGAGCCGGTGATACTCGCTGTATGAGTCAGTGTAGCACGCGTGCGGCCC AGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGCA GTTGCTTGCAAAGTCCCTCTAAGAAGTCGCGGCCAATGAGTATTGTCGCG ACTATTTAGTAGGCTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA AAGAGCTATCAATCTGTCAATCCTCACTATGTCTGGACCTGGTAAGTTTC CCCGTGTTGAGTCAAATTGAGCCGCAAGCTCCACGCCTGGNGGTGCCCTT CCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCNNAACC CAAAGACTTTGATTTCTCATACGGTGCCGAAAGGAGTTAACTCTAGCCCC CGATCCCCGAGTC TCTCCCAGCCGGTCTGTACGTGTCTAAAGCAGCNTTTATGGCAANGCATNCGGTGATAGACAGTGCCCAGTAAANAGCAGTCCAAAAATATACAGATCTGGTTGATATCCATTGATCAGAACATTNGTTTTTCCGGCCAATATCCTGTCATAGCCGTNCAATCAGTAAGCGCAATGGAATTTCCATCTTGCCATATGGCCGGAAAAAGCTAATGTTTTGATCATGTCATATCAACCAATTAGGTTAATTTTGGGACTGGGCTTTACTGGCAAAATNGTATCACGGATGCCGGTTGATAAAGGGNAATNGTTCGGGGATCATAACGGGGGGGAGCAAGCCATGAAAGTGCCATTCACTGCCTTNGGAAACATGATGGGGCAGAAACGAGACTGGTTCGGGNGGGGCCGAGCCCATGCGATCTGATTTAGTTGGTATGAGTCACCTCAATAGCTGCATTGCCCACACCNATATCNAATAAATACGGCCCTTCGTGAGTCGGGCTCAGCTGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAATTTTGATTACCAAATAAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCATTGTATACCATTTATACTTAGACAT
Importance of organism and transcriptomes	Blooms of toxic phytoplankton can negatively impact coastal ecosystems and economies through poisoning events that induce high mortality rates in fish (Landsberg, 2002), birds (Shumway et al. 2003; Jessup et al. 2009), and illness in humans (Van Dolah et al. 2001). The succes of the toxic raphidophite Heterosigma akashiwo depends on an interplay of halotolerance and a reduction in predator induced mortality rates (Harvey & Menden-Deuer 2011). In a series of linked nominations we investigate the genetic basis for the halotolerance of several predator and toxic algal species. This transcriptome will supply information on gene expression in this HAB species in response to predation and exposure to a heterotrophic protists predator.
Additional citations and references
Primary citation for organism's characterization, if available	doi:10.4319/lo.2011.56.1.0371
Latitude	41.30051
Longitude	-71.71543
Depth (m)	1
Salinity (psu)	30.68
Collection date	22-MAY-10
Sample collection site	Atlantic_Ocean
Other collection site info	off shore of Quonochontaug Pond, Rhode Island
Sample material (e.g. "seawater," "sediment," etc.)	seawater
ENVO term for habitat - primary term	Acquatic: marine
Habitat	marine habitat
Country	UNITED STATES
Experimental Data
Date of experiment	28-MAR-12
Growth medium	seawater
Modifications to growth medium	0.2um filtered, autoclaved
Temperature (ºC)	15
Salinty (psu)	29.4
Light (µmol photons / m2 / sec)	8
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Prey organism, if applicable (genus and species)	Heterosigma akashiwo CCMP3107
Investigation type	Eukaryotes
Other experimental metadata available	not axenic; hungry Favella cultures were exposed to Heterosigma for 24hours and then harvested