Favella taraikaensis Fe Narragansett Bay

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Environmental Data
Principle Investigator(s)	Susanne Menden-Deuer
External sample ID	Heterocapsa + Fe
NCGR Sample ID	MMETSP0436
Sample accession number	CAM_SMPL_002572
Assembly accession number	CAM_ASM_000390
Combined Assembly Name	Favella_taraikaensis_FeNarragansettBay
Genus	Favella
Species	taraikaensis
Strain	Fe Narragansett Bay
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	626734
18S rRNA	CTAGTGATGTGGTTTACTCGACTTTCCAAA AGTACTCGAGGCACTCTCGGTCCAAAGGGTTCACCGGACCACTCGAAATC GGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAATCAACGCA GGCTGATGACCTGCGCTTACTAGGCATTCCTCGTTCAAGATCAAAAATTC CAAAGATCTATCCCCAGCACGACTCATATTGCTGATTACCGGCAGCCTTT CGGAGCCGGTGATACTCGCTGTATGAGTCAGTGTAGCACGCGTGCGGCCC AGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGCA GTTGCTTGCAAAGTCCCTCTAAGAAGTCGCGGCCAATGAGTATTGTCGCG ACTATTTAGTAGGCTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA AAGAGCTATCAATCTGTCAATCCTCACTATGTCTGGACCTGGTAAGTTTC CCCGTGTTGAGTCAAATTGAGCCGCAAGCTCCACGCCTGGNGGTGCCCTT CCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCNNAACC CAAAGACTTTGATTTCTCATACGGTGCCGAAAGGAGTTAACTCTAGCCCC CGATCCCCGAGTC TCTCCCAGCCGGTCTGTACGTGTCTAAAGCAGCNTTTATGGCAANGCATNCGGTGATAGACAGTGCCCAGTAAANAGCAGTCCAAAAATATACAGATCTGGTTGATATCCATTGATCAGAACATTNGTTTTTCCGGCCAATATCCTGTCATAGCCGTNCAATCAGTAAGCGCAATGGAATTTCCATCTTGCCATATGGCCGGAAAAAGCTAATGTTTTGATCATGTCATATCAACCAATTAGGTTAATTTTGGGACTGGGCTTTACTGGCAAAATNGTATCACGGATGCCGGTTGATAAAGGGNAATNGTTCGGGGATCATAACGGGGGGGAGCAAGCCATGAAAGTGCCATTCACTGCCTTNGGAAACATGATGGGGCAGAAACGAGACTGGTTCGGGNGGGGCCGAGCCCATGCGATCTGATTTAGTTGGTATGAGTCACCTCAATAGCTGCATTGCCCACACCNATATCNAATAAATACGGCCCTTCGTGAGTCGGGCTCAGCTGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAATTTTGATTACCAAATAAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCATTGTATACCATTTATACTTAGACAT
Importance of organism and transcriptomes	Blooms of toxic phytoplankton can negatively impact coastal ecosystems and economies through poisoning events that induce high mortality rates in fish (Landsberg 2002), birds (Shumway et al. 2003; Jessup et al. 2009), and illness in humans (Van Dolah et al. 2001). The success of the toxic raphidophite Heterosigma akashiwo partly depends on an interplay of high halotolerance and a reduction in predator induced mortality rates (Harvey & Menden-Deuer 2011). In a series of linked nominations, we investigate the genetic basis for the halotolerance of several predator and toxic algal strain. In combination, these transcriptomes would provide detailed information for hypothesis driven investigations into the puzzling success of this, and by implication, other HAB species.
Additional citations and references
Primary citation for organism's characterization, if available	doi:10.4319/lo.2011.56.1.0371
Latitude	41.30051
Longitude	-71.71543
Depth (m)	1
Salinity (psu)	30.68
Collection date	22-MAY-10
Sample collection site	Atlantic_Ocean
Other collection site info	off shore of Quonochontaug Pond, Rhode Island
Sample material (e.g. "seawater," "sediment," etc.)	seawater
ENVO term for habitat - primary term	Acquatic: marine
Habitat	marine habitat
Country	UNITED STATES
Experimental Data
Date of experiment	16-DEC-11
Growth medium	seawater
Modifications to growth medium	0.2um filtered, autoclaved
Temperature (ºC)	15
Salinty (psu)	29.4
Light (µmol photons / m2 / sec)	8
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Prey organism, if applicable (genus and species)	Heterocapsa triquetra, CCMP 448
Investigation type	Eukaryotes
Other experimental metadata available	not axenic