Strombidinopsis sp SopsisLIS2011

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Environmental Data
Principle Investigator(s)	George McManus
External sample ID	SopsisLIS
NCGR Sample ID	MMETSP0463
Sample accession number	CAM_SMPL_002569
Assembly accession number	CAM_ASM_000387
Combined Assembly Name	N/A
Genus	Strombidinopsis
Species	sp
Strain	SopsisLIS2011
Clonal	Unknown
Axenic	No
Prelim. NCBI Taxon ID	181622
18S rRNA	AAAGACTAAGCCTGCATGTCTAAGTATAAGTGTTATACATCGAAACTGCGAATGGCTCATTAAAACAGTT ATAGTTTATTTGGTAATCGAAATTACATGGATAACCGTGGTATCTTCTAGAGCTAATACATGCTGGTTAG CCCGACTTCTCGGAAGGGCTGTATTTATTAGATAACAGACCAATATTCCTTCGTGTCTATTGTGGTGACT CATAGTAACTGATCGGATCGCATGGCCTTGTGCCGCGATAAACCATTCAAGTTTCTGACCCATCAGCTTT CGATGGTAGTGTATTGGACTACCATGGCTTTCACGGGTAACGGAGGATTAGGGTTCGATTCCGGAGAGGG AGCCTGAGAAACGGCTACCACATCTAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCTGATTCAGGGA GGTAGTGACAAGAAATAACGGGTCGGGGCATCTGCCTCGGGATTGCAATGAATCGAATTTACACCCCTTA ATGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTA AAGTTGTTGCAGTTAAAAAGCTCGTAGTTTGATTTCTGGACGGGCGCCAACACCCGCTTGTTAGTGTGGA GGCGGCACCCGCCCATCCTTCTGTTAACGCCGCCGGCATTTGTTTGCTGGTGGCGGGCTCAGATATTTTA CCTTGAGAAAATTAGAGTGTTTCAGGCAGGCTTGCGCCTAGATACATTAGCATGGAATAATAGAATAGGA CTTTGACCTCTTCTGTTGGTCTGAGGGGTGAGAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTACT TAACTGCTAGAGGTGAAATTCTCAGATTTGTTAAAGACTAACTTATGCGAAAGCATTTGCCAAGGATGTT TTCATTAATCAAGAACGAAAGTTAGGGGATCAAAGACGATCAGATACCGTCCTAGTCTTAACCATAAACT ATGCCGACTCGGGATCGGGGGCGAGCATTATCCGTCTTCGGCACCGTATGAGAAATCAAAGTCTTTGGGT TCTGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGCGTGGAGC TTGCGGCTCAATTTGACTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGATTGAT AGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAA TTCCGTTAACGAACGAGACCTTAGCCTACTAACTAGTCGCACCAAGCACGCTTGGTGCCGACTTCTTAGA GGGACTTTGTGCTTTTTAAACACAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTCCT GGGCCGCACGCGTGCTACACTGACGCATACAGCGAGTACACCCCAGCCCCGAGAGGCGGTTGGTAATCAG CAATATGCGTCGTGATGGGGATAGAGCTTTGGAATTCTGGCTCTTGAACGAGGAATGCCTAGTAAGCGCA AGTCATCAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTTCGAG TGGTCCGGTGAACCTTTCGGACCGTGGGCGCCCTTGTGGTGCCCGTGGAAAGTCAAGTAAACCACATCAC TTAGAGGAAGGATAAGTCGTAACAAGG
Importance of organism and transcriptomes	This large planktonic ciliate is found in coastal and estuarine waters worldwide. It is easily culturable and has been used as a model organism for studies of microzooplankton grazing on phytoplankton.
Additional citations and references
Primary citation for organism's characterization, if available	Montagnes, D J S, and D H Lynn. ?Taxonomy of Choreotrichs, the major marine ciliates, with emphasis on the aloricate forms.? Mar Micro Food Webs 5, no. 1 (1991): 59-74.
Latitude	41
Longitude	-72
Sample collection site	Atlantic_Ocean
Other collection site info	Long Island Sound
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Not Applicable
Habitat description	Estuary/shelf
Other environmental metadata available	no other data available
Other environmental metadata available	no other data available
Habitat	marine habitat
Country	UNITED STATES
Experimental Data
Date of experiment	15-AUG-11
Growth medium	F/20
Modifications to growth medium	no Si
Temperature (ºC)	19
Salinty (psu)	30
pH	8
Light (µmol photons / m2 / sec)	100
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	90
Phosphate (μmol/L)	3.6
Trace elements (total) (nmol/L)	1000
Prey organism, if applicable (genus and species)	Rhodomonas lens