Oxyrrhis marina Unknown

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Environmental Data
Principle Investigator(s)	Susanne Menden-Deuer
External sample ID	Oxy Starved
NCGR Sample ID	MMETSP0471
Sample accession number	CAM_SMPL_002784
Assembly accession number	CAM_ASM_000602
Combined Assembly Name	Oxyrrhis-marina
Genus	Oxyrrhis
Species	marina
Strain	Unknown
Clonal	No
Axenic	No
Prelim. NCBI Taxon ID	2969
18S rRNA	NCGATGCTTGTTGC ACNAGGCTCANGAGCGTTCGAACAATCGTGACCATTCACCGGATTACTCA TCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAATCAACA CAGATTGTTGATCTGTTCTTACTAGGAATTCCTCGTTCAAGATAAAAAAT AACAATCATCTATTCCCGGCACGGCATCGTTGCTTGATCCTATGTTCTTG TCAGACATAGGTACATTGGGGCATGTGCCATTGTAGCGCGCGTGCAGCCC ACGACATCTAAGGGCATCACATACCTGTTATTGCCCGACTCTTCCGTGCA TTACTCACGCAATGTCCCTCTAAGTGTACCAACATTCCAAAGACTGTTGC AACAGTTAGCANAATAGGATCTCGTTCGTTAACGGAATTAACCAGACAAA TCACTCCACCAACTAAAAACGGCCATGCACCACCACCCATACAATCCAGA AAGAGCAATTAATCTGTCAATCCTGCGTATGTCTGGACTTGGTGAGATTT CCCGTGTTGAGTCAAATTAAGCCGCAAGCTCCACTCCTGGTGGTGCCCTT CCGTCAATTCCTTTAAGTTTCAGTCTTGCAACTATACTCCCCCCGGAGCC CACACNCTTACTCTTTTCAGGCACAATACTGAATATATTTTCTCTCCATA TATTCCAATTTCCAGTTGGCATANTTTATGGTTAAGACTANGACGGNATC TGATCGTCTTCNATCCCCTAACTTTCGTTCTTGATCAAATGAAACATCCA TGATAAATGCTATTGCATTTTGTTCATCTTTGACAAATCCAAGAATTTTC ACCTCTAACTGTCAAATATGAGTATCCCCAACACCTCATATCAATCATTA CCACGTGTCCCGAAACCGTTCAAAAA TCCACTTTCATCAAAGTAACTAAGTAGTATTNTGCACATTTAATGAAAAACATACACAAATTCTACAGTGTGCAATGCAACAATACAAGTCCTACCCAGGGGGTTGACTGTACCAGCATAGCATAAATCCAAATACGAGCTTTTCAACCGCAACAACTTTAATATACACTCTTGGAGGTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATAGATACTCGCAACACGCTTAACCTGTCACACATTCCGGATGTGCAGCATAGAGCCACACACAGTTATTTCTTGTCATTACGTCCGGGTGTCAAGATTGGGTAATTTACGCGCCTGATGCGTTCGTTAGATGTAGGCGCTATTTTTCAAGAGTCCTCTCTGAGATCAAACCNTAATTTTTCGCCACCGGTAACAGCCATAATACGTTAGTAGGGTATCATCGCAAGAAGATAGGTAAGAATATAATGGCCTATGTGCCAAGCAACAGCTTACATAATTGTATTGCACATATTCCCAATAAATTGGTGATATTTCAACTCATCATGTGCATGTCTTGGAACTGCCTTNNCATGTGCATCCATTAGCCTCAGAATTACAGAAGGTATAGATANTANTATTATGACTTATCATATACAATTTTATAATGAGCTTTCCGCAGTTTTCTAATGCAAAATATATA
Importance of organism and transcriptomes	Oxyrrhis marina is a widely studied heterotrophic protists (e.g. see recent special issue in Journal of Plankton Research). Unlike most other heterotrophic protists, this species is easily maintained in culture, grows to high abundances and feeds on a wide spectrum of phytoplankton prey species. These O. m. cultures that have been starved for several weeks and recently fed cultures to s to identify gene expression associated with active feeding.
Additional citations and references
Primary citation for organism's characterization, if available	doi:10.1093/plankt/fbq121
ENVO term for habitat - primary term	Acquatic: marine
Other environmental metadata available	probably orginiated from Hans Henrick Jacobsen, Denmark; SMPC 107
Other environmental metadata available	probably orginiated from Hans Henrick Jacobsen, Denmark; SMPC 107
Habitat	marine habitat
Experimental Data
Date of experiment	30-JAN-12
Growth medium	seawater
Modifications to growth medium	0.2um filtered, autoclaved
Temperature (ºC)	15
Salinty (psu)	29.4
Light (µmol photons / m2 / sec)	8
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Prey organism, if applicable (genus and species)	Isochrysis galbana CCMP1323
Investigation type	Eukaryotes
Other experimental metadata available	not axenic; harvested 1 week post feeding - starved