Amphidinium massartii CS-259

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Environmental Data
Principle Investigator(s)	Shauna Murray
External sample ID
NCGR Sample ID	MMETSP0689_2
Sample accession number	CAM_SMPL_002799
Assembly accession number	CAM_ASM_000617
Combined Assembly Name	N/A
Genus	Amphidinium
Species	massartii
Strain	CS-259
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	160604
18S rRNA	ACAAAACTTCCCATAACTGCATCCAGGAACTGAACGCGTTACAGTCCGAATAATTCACCGGATCACTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAATCAGCACGGGCTGATGACACATGCTTACTAGGAATTCCTCGTTGAAGATTAATAATTACAATAATCGATCCCCATCACGATGCACTTTCCAGAGGTTACCCCACCCTCCCAGGCAAGGTGGTGGACTCGCTGAAAGTATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTCATGCTAGGCGCACGAAGTCCCTCTAAGAAACTGTCCACAAAACCACAGCTATGCATAGCTACTTAGCCAGATAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCACGAAAGAGCTATCAATCTGTCGATCCTACCTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCAGAACCC-AAAGACTTTGATTTCTCATCAGGTG-CTGATGGGGTCGTG-CAACTAACGACCACCAATCCCTAGTTGGCATAGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTCGATCCCCTAACTTTCGTTCTTGATCAATGAAAACATCCTGGGCAAACGCTTTCGCAGTTGTCCGTCTTTAGCAGATCCAAGAATTTCACCTCTGACGGCTAAATTCGG-ATGCCCCCAACAATCCCCATTAATACTCACCTCAGCTCCAGAAACCGACAAATTGG-AGCAAAAGCCCAATCTAATTATTCCATGCTACTGTGTCCAAAGGCATGTGCCTGCTTGAAACACTCCAATTTCCTCAAAGTGAAAGTG-CTGAACACTGCGCCACACAGCC-AAGTGCAGCAACAGCTTCCAGCAAGATGTCAAGACCAAACTATGTGCTCACCCGGAGGGCGGACCAGTTGTCCTTGACAGAAATCCAACTACGAGCTTTTTAACCGCAACAGCTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATTGATACTCACCAACATGTTTGGAGTTAGCTCATTCCAATTACAAGACATGGATGCCCCGTATTGTTATTGCTTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCATGTGTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCATTGCCACAGTAGGCCAATACCCTAGCGTCGGAAGCTGATAGGTCAGAAACTTGTGCAGTTCATCACCAGCTGAAGCAATGCGATCAGCTAAATTATCATGACTCACCTTGGTAGCAAGGCAGAGCCTGCGCCGATTCTATGACTCATGATAGCAACCTTTCCTCGAAGTCAGGTGTGCCGCATGTATTAGCCCTAGATTTTCCACAGTTATCCATGTGTGATGAAGCACTGCGAAAATTATTGCTGTTGTAATGAGCCATTTGCAGCCTTGCTGAAAATCACTTATGC
Importance of organism and transcriptomes
Additional citations and references
Primary citation for organism's characterization, if available	Murray, S., Jorgensen, M.F., Daugbjerg, N., Rhodes, L., 2004. Amphidinium revisited. II. Resolving species boundaries in the Amphidinium operculatum species complex (Dinophyceae), including the descriptions of Amphidinium trulla sp nov and Amphidinium gibbosum. comb. nov. Journal of Phycology 40, 366-382.
Latitude	-17
Longitude	146
Salinity (psu)	35
Collection date	01-JAN-87
Sample collection site	Pacific_Ocean
Sample material (e.g. "seawater," "sediment," etc.)	seawater
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Not Applicable
Habitat description	tropical ocean sample
Other environmental metadata available	none
Other environmental metadata available	none
Habitat	marine habitat
Country	AUSTRALIA
Experimental Data
Date of experiment	12-APR-11
Growth medium	f/2
Modifications to growth medium	f/2 for all nutrients except silicate
Temperature (ºC)	20
Salinty (psu)	35
pH	7.8
Light (µmol photons / m2 / sec)	80
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	645
Phosphate (μmol/L)	25
Trace elements (total) (nmol/L)	1092