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Asterionellopsis glacialis CCMP134

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Principle Investigator(s) Sarah Smith
External sample IDA.glacialis_Si-limited
NCGR Sample IDMMETSP0706
Sample accession numberCAM_SMPL_002836
Assembly accession numberCAM_ASM_000654
Combined Assembly NameAsterionellopsis-glacialis-CCMP134
GenusAsterionellopsis
Speciesglacialis
StrainCCMP134
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID33640
18S rRNA
Importance of organism and transcriptomesAsterionellopsis glacialis is a chain-forming pennate diatom commonly found in the cold to temperate ocean waters globally.
Additional citations and references
Environmental Data
Latitude32.655
Longitude117.14
Collection date01-MAY-63
Sample collection sitePacific_Ocean
Other collection site infoSan Diego Bay
ENVO term for habitat - primary termAcquatic: marine
Habitatmarine habitat
CountryUNITED STATES
Experimental Data
Date of experiment24-AUG-11
Growth mediumNEPC
Modifications to growth mediumCells grown exponentially in NEPC were harvested by centrifugation and re-suspended in NEPC with no SiO3
Temperature (ºC)20
pH8
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours24
Nitrate (μmol/L).55
Phosphate (μmol/L).01
Trace elements (total) (nmol/L)16.33
Investigation typeEukaryotes
Other experimental metadata availablecell concentration, neutral lipid content (fluorometrically determined with Nile Red)