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Asterionellopsis glacialis CCMP134
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Principle Investigator(s) | Sarah Smith |
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External sample ID | A.glacialis_Si-limited |
NCGR Sample ID | MMETSP0706 |
Sample accession number | CAM_SMPL_002836 |
Assembly accession number | CAM_ASM_000654 |
Combined Assembly Name | Asterionellopsis-glacialis-CCMP134 |
Genus | Asterionellopsis |
Species | glacialis |
Strain | CCMP134 |
Clonal | Yes |
Axenic | No |
Prelim. NCBI Taxon ID | 33640 |
18S rRNA | |
Importance of organism and transcriptomes | Asterionellopsis glacialis is a chain-forming pennate diatom commonly found in the cold to temperate ocean waters globally. |
Additional citations and references | |
Environmental Data | |
Latitude | 32.655 |
Longitude | 117.14 |
Collection date | 01-MAY-63 |
Sample collection site | Pacific_Ocean |
Other collection site info | San Diego Bay |
ENVO term for habitat - primary term | Acquatic: marine |
Habitat | marine habitat |
Country | UNITED STATES |
Experimental Data | |
Date of experiment | 24-AUG-11 |
Growth medium | NEPC |
Modifications to growth medium | Cells grown exponentially in NEPC were harvested by centrifugation and re-suspended in NEPC with no SiO3 |
Temperature (ºC) | 20 |
pH | 8 |
Light (µmol photons / m2 / sec) | 200 |
Day portion of day:night cycle in hours | 24 |
Nitrate (μmol/L) | .55 |
Phosphate (μmol/L) | .01 |
Trace elements (total) (nmol/L) | 16.33 |
Investigation type | Eukaryotes |
Other experimental metadata available | cell concentration, neutral lipid content (fluorometrically determined with Nile Red) |