Marine Microbial Eukaryote Transcriptome Sequencing Project
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Chaetoceros curvisetus Unknown
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| Principle Investigator(s) | Sarah Smith |
|---|---|
| External sample ID | C.curvisetus_Exponential |
| NCGR Sample ID | MMETSP0717 |
| Sample accession number | CAM_SMPL_002848 |
| Assembly accession number | CAM_ASM_000666 |
| Combined Assembly Name | Chaetoceros-curvisetus |
| Genus | Chaetoceros |
| Species | curvisetus |
| Strain | Unknown |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 230516 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Chaetoceros curvisetus is a chain-forming centric diatom commonly found in the cold to temperate ocean waters globally. |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 32.9 |
| Longitude | 117.255 |
| Sample collection site | Pacific_Ocean |
| Other collection site info | SIO Pier |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat description | mesotrophic coastal ocean |
| Other environmental metadata available | SIO Pier is a SCCOOS monitoring site |
| Other environmental metadata available | SIO Pier is a SCCOOS monitoring site |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 19-AUG-11 |
| Growth medium | ASW |
| Modifications to growth medium | Cells grown exponentially in ASW were harvested by centrifugation and re-suspended in ASW with no SiO3 |
| Temperature (ºC) | 20 |
| Salinty (psu) | 29 |
| pH | 8 |
| Light (µmol photons / m2 / sec) | 200 |
| Day portion of day:night cycle in hours | 24 |
| Nitrate (μmol/L) | 2.97 |
| Phosphate (μmol/L) | .2 |
| Trace elements (total) (nmol/L) | 19.73 |
| Investigation type | Eukaryotes |
| Other experimental metadata available | cell concentration, neutral lipid content (fluorometrically determined with Nile Red) |