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Amphiprora sp. CCMP467

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Principle Investigator(s) Sarah Smith
External sample IDA.sp_Nocodazole
NCGR Sample IDMMETSP0727
Sample accession numberCAM_SMPL_002709
Assembly accession numberCAM_ASM_000527
Combined Assembly NameAmphiprora-sp
GenusAmphiprora
Speciessp.
StrainCCMP467
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID265536
18S rRNA
Importance of organism and transcriptomesAmphiprora sp. is an unusual benthic pennate diatom that is common in the marine environment but has not been well-represented in the published literature.
Additional citations and references
Environmental Data
ENVO term for habitat - primary termAcquatic: marine
Habitatmarine habitat
Experimental Data
Date of experiment01-DEC-11
Growth mediumNEPC
Modifications to growth mediumNEPC for all nutrients + 2.5mg L-1 of the microtubule inhibitor nocodazole
Temperature (ºC)20
Salinty (psu)30
pH8
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Nitrate (μmol/L).55
Phosphate (μmol/L).01
Silicate (μmol/L).11
Trace elements (total) (nmol/L)16.33
Investigation typeEukaryotes
Other experimental metadata availablegrowth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy)