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Nitzschia punctata CCMP561

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Principle Investigator(s) Sarah Smith
External sample IDN.punctata_Si-limited
NCGR Sample IDMMETSP0745
Sample accession numberCAM_SMPL_002748
Assembly accession numberCAM_ASM_000566
Combined Assembly NameNitzschia-punctata-CCMP561
GenusNitzschia
Speciespunctata
StrainCCMP561
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID913974
18S rRNA
Importance of organism and transcriptomesNitzschia punctata is an unusual benthic pennate diatom that tolerates a wide range of salinity regimes. It readily accumulates intracellular droplets of triacylglycerol.
Additional citations and references
Environmental Data
ENVO term for habitat - primary termAcquatic: marine
Habitatmarine habitat
Experimental Data
Date of experiment01-DEC-11
Growth mediumASW
Modifications to growth mediumASW for all nutrients except silicate, which was not added
Temperature (ºC)20
Salinty (psu)30
pH8
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours24
Nitrate (μmol/L)2.97
Phosphate (μmol/L).2
Silicate (μmol/L).42
Trace elements (total) (nmol/L)19.73
Investigation typeEukaryotes
Other experimental metadata availablegrowth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy)