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Nitzschia punctata CCMP561

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Principle Investigator(s) Sarah Smith
External sample IDN.punctata_N-limited
NCGR Sample IDMMETSP0746
Sample accession numberCAM_SMPL_002749
Assembly accession numberCAM_ASM_000567
Combined Assembly NameNitzschia-punctata-CCMP561
GenusNitzschia
Speciespunctata
StrainCCMP561
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID913974
18S rRNA
Importance of organism and transcriptomesNitzschia punctata is an unusual benthic pennate diatom that tolerates a wide range of salinity regimes. It readily accumulates intracellular droplets of triacylglycerol.
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Environmental Data
ENVO term for habitat - primary termAcquatic: marine
Other environmental metadata availablegrowth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy)
Other environmental metadata availablegrowth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy)
Habitatmarine habitat
Experimental Data
Date of experiment01-DEC-11
Growth mediumASW
Modifications to growth mediumASW for all nutrients except nitrate, which was not added
Temperature (ºC)20
Salinty (psu)30
pH8
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours24
Phosphate (μmol/L).2
Silicate (μmol/L).42
Trace elements (total) (nmol/L)19.73
Investigation typeEukaryotes
Other experimental metadata availablecell concentration, neutral lipid content (fluorometrically determined with Nile Red)