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Nitzschia punctata CCMP561
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Principle Investigator(s) | Sarah Smith |
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External sample ID | N.punctata_N-limited |
NCGR Sample ID | MMETSP0746 |
Sample accession number | CAM_SMPL_002749 |
Assembly accession number | CAM_ASM_000567 |
Combined Assembly Name | Nitzschia-punctata-CCMP561 |
Genus | Nitzschia |
Species | punctata |
Strain | CCMP561 |
Clonal | Yes |
Axenic | No |
Prelim. NCBI Taxon ID | 913974 |
18S rRNA | |
Importance of organism and transcriptomes | Nitzschia punctata is an unusual benthic pennate diatom that tolerates a wide range of salinity regimes. It readily accumulates intracellular droplets of triacylglycerol. |
Additional citations and references | |
Environmental Data | |
ENVO term for habitat - primary term | Acquatic: marine |
Other environmental metadata available | growth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy) |
Other environmental metadata available | growth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy) |
Habitat | marine habitat |
Experimental Data | |
Date of experiment | 01-DEC-11 |
Growth medium | ASW |
Modifications to growth medium | ASW for all nutrients except nitrate, which was not added |
Temperature (ºC) | 20 |
Salinty (psu) | 30 |
pH | 8 |
Light (µmol photons / m2 / sec) | 200 |
Day portion of day:night cycle in hours | 24 |
Phosphate (μmol/L) | .2 |
Silicate (μmol/L) | .42 |
Trace elements (total) (nmol/L) | 19.73 |
Investigation type | Eukaryotes |
Other experimental metadata available | cell concentration, neutral lipid content (fluorometrically determined with Nile Red) |