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Chaetoceros neogracile CCMP1317
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Principle Investigator(s) | Sarah Smith |
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External sample ID | C.neogracile_Nocodazole |
NCGR Sample ID | MMETSP0754 |
Sample accession number | CAM_SMPL_002770 |
Assembly accession number | CAM_ASM_000588 |
Combined Assembly Name | Chaetoceros-neogracile-CCMP1317 |
Genus | Chaetoceros |
Species | neogracile |
Strain | CCMP1317 |
Clonal | Yes |
Axenic | No |
Prelim. NCBI Taxon ID | 240364 |
18S rRNA | |
Importance of organism and transcriptomes | Chaetoceros neogracile is an abundant oceanic diatom with a global distribution. It is one of the dominant types of marine diatoms found at the SIO Pier, a long term monitoring site. |
Additional citations and references | |
Environmental Data | |
ENVO term for habitat - primary term | Acquatic: marine |
Habitat | marine habitat |
Experimental Data | |
Date of experiment | 01-DEC-11 |
Growth medium | NEPC |
Modifications to growth medium | NEPC for all nutrients + 2.5mg L-1 of the microtubule inhibitor nocodazole |
Temperature (ºC) | 20 |
Salinty (psu) | 30 |
pH | 8 |
Light (µmol photons / m2 / sec) | 200 |
Day portion of day:night cycle in hours | 24 |
Nitrate (μmol/L) | .55 |
Phosphate (μmol/L) | .01 |
Silicate (μmol/L) | .11 |
Trace elements (total) (nmol/L) | 16.33 |
Investigation type | Eukaryotes |
Other experimental metadata available | growth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy) |