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Chaetoceros neogracile CCMP1317

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Principle Investigator(s) Sarah Smith
External sample IDC.neogracile_Nocodazole
NCGR Sample IDMMETSP0754
Sample accession numberCAM_SMPL_002770
Assembly accession numberCAM_ASM_000588
Combined Assembly NameChaetoceros-neogracile-CCMP1317
GenusChaetoceros
Speciesneogracile
StrainCCMP1317
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID240364
18S rRNA
Importance of organism and transcriptomesChaetoceros neogracile is an abundant oceanic diatom with a global distribution. It is one of the dominant types of marine diatoms found at the SIO Pier, a long term monitoring site.
Additional citations and references
Environmental Data
ENVO term for habitat - primary termAcquatic: marine
Habitatmarine habitat
Experimental Data
Date of experiment01-DEC-11
Growth mediumNEPC
Modifications to growth mediumNEPC for all nutrients + 2.5mg L-1 of the microtubule inhibitor nocodazole
Temperature (ºC)20
Salinty (psu)30
pH8
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours24
Nitrate (μmol/L).55
Phosphate (μmol/L).01
Silicate (μmol/L).11
Trace elements (total) (nmol/L)16.33
Investigation typeEukaryotes
Other experimental metadata availablegrowth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy)