Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Gambierdiscus australes CAWD 149
Gambierdiscus australes CAWD 149
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| Principle Investigator(s) | Shauna Murray |
|---|---|
| External sample ID | |
| NCGR Sample ID | MMETSP0766_2 |
| Sample accession number | CAM_SMPL_002780 |
| Assembly accession number | CAM_ASM_000598 |
| Combined Assembly Name | N/A |
| Genus | Gambierdiscus |
| Species | australes |
| Strain | CAWD 149 |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 439317 |
| 18S rRNA | |
| Importance of organism and transcriptomes | |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Rhodes L.L., Smith K. F., Munday R., Selwood A.I., McNabb P.S., Holland, P.T., Bottein M.Y. (2009) Toxic dinoflagellates from Rarotonga (Cook Islands). Toxicon doi:10.1016/j.toxicon.2009.05.017 |
| Latitude | 35 |
| Longitude | 173 |
| Collection date | 05-MAY-07 |
| Sample collection site | Pacific_Ocean |
| Sample material (e.g. "seawater," "sediment," etc.) | seaweed surface washed with seawater |
| Filter fraction minimum (μm) | 16 |
| Filter fraction maximum (μm) | 80 |
| Habitat description | Dinoflagellate cells were isolated from the green calcareous seaweed, Halimeda sp. (class Chlorophyceae, order Bryopsidales, family Udoteaceae), which was growing on disturbed coral in lagoon. |
| Habitat | organism-associated habitat |
| Country | COOK ISLANDS |
| Experimental Data | |
| Date of experiment | 12-APR-11 |
| Growth medium | f/2 |
| Modifications to growth medium | f/2 for all nutrients except silicate |
| Temperature (ºC) | 25 |
| Salinty (psu) | 35 |
| pH | 7.8 |
| Light (µmol photons / m2 / sec) | 80 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 645 |
| Phosphate (μmol/L) | 25 |
| Trace elements (total) (nmol/L) | 1092 |
| Investigation type | Eukaryotes |