Palpitomonas bilix NIES-2562

Downloads:

Reads

Annotations

Peptides

Contigs

CDS

Environmental Data
Principle Investigator(s)	John Archibald
External sample ID	PB1
NCGR Sample ID	MMETSP0780_2
Sample accession number	CAM_SMPL_002781
Assembly accession number	CAM_ASM_000599
Combined Assembly Name	N/A
Genus	Palpitomonas
Species	bilix
Strain	NIES-2562
Clonal	Unknown
Axenic	No
Prelim. NCBI Taxon ID	652834
18S rRNA	TAGTCATATGCTTGTCTCAAAGATAAGCCATGCATGTCTAAGTATAAGCATTTATACTGTGAAACTGCGA ATGGCTCATTAAATCAGTTATAGTTTATTTGATGGTATTTCACTATGGATAACCGTAGTAATTCTAGAGC TAATACATATGATAAATCCCGACTTCTGGAAGGGACGTATTTATTAGATCCAAGACCAATGCCCTCGGGC TCTTTGGTGAATCATAATAACTAAACGAATCGCGTGGCCTTGTGCAGCGATGCTTCATTCAAATTTCTGC CCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTTTTCACGGGTAACGGAGAATTGGGGTTCGA TTCCGGAGAGGGGGCCTGAGAGATGGCCACCACTTCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATC CTGACACAGGGAGGTAGTGACAATAAATAACAATACAGGGCTCTTTGAGTCTTGTAATTGGAATGAGAAC AATTTAAATCCCTTATCGAGTACCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTC CAAAAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTCGAACCTAAGGGCAAACGTCCGTGCCC GACCTCTGGTCGTGGCGTGGAGTGCGCTCTTCCTTCTGTGGGTCGGTGTCGGCTTCACGGCCGGCGCCGG AACGCAGATCCTTCACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTTCGCTTGAATATTCTAGCATGG AATGATAGAACAGGACTCTGGTTCAATTGTGTTGGTCTATTGGACCGGAGTAATGATTAATAGGGACAGT CGGGGGCGTTCGTATTTCATTGTCAGAGGTGAAATTCTTAGATTTATGAAAGACGAACTTCTGCGAAAGC ATTCGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTAGGGGATCGAAGACGATTAGATACCGTCGTA GTCTTAACCATAAACCATGCCGACTAGGGATTGGGGGATGAACATTCGTCGCCCTCAGCACCTTGTGAGA AATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGCAAGGC ACCACGGGGGATGGGATCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGT AAGGATTGACAGATTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGG AGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCGACCTACTAACTAGTAAGGCGATCTCCGGA TCGTCGCAACTTCTTAGAGGGACTATTCGCGATTAGCGGATGGAAGTTCGAGGCAATAACAGGTCTGTGA TGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGATGAAGGCAGCGAGTCCACCTTGGTCGGAAGG CCCGGGTAATCTTGTGAAACTTCATCGTGATGGGGATAGATCATTGCAATTATTGATCTTCAACGAGGAA TTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGTCCTTTGTACACACCGCCCGTCGCT CCTACCGATTGTGTGCACAGGTGAGGACTAGGGAGCCCCGATGTAGGGTAGTTTCTACCCCACTTTGGGA CGAACTTGTCCAATCTTTTCACTGAGAGGGAAGTCGTAACAGGT
Importance of organism and transcriptomes	Palpitomonas bilix is a marine heterotrophic flagellate and represents a novel eukaryotic lineage whoes phylogenetic affinities to other eukaryotic groups are unknown.
Additional citations and references
Primary citation for organism's characterization, if available	PMID: 20418156
Collection date	08-JUN-06
Other collection site info	Shore of Macharchar Island
Sample material (e.g. "seawater," "sediment," etc.)	Seawater
Habitat	marine habitat
Country	PALAU
Experimental Data
Date of experiment	17-JAN-11
Growth medium	ESM medium
Modifications to growth medium	No modification
Temperature (ºC)	20
Salinty (psu)	35
pH	8
Night portion of day:night cycle in hours	24
Investigation type	Eukaryotes