Thalassionema frauenfeldii CCMP 1798

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Environmental Data
Principle Investigator(s)	E. Virginia Armbrust
External sample ID	Thalassionema frauenfeldii
NCGR Sample ID	MMETSP0786
Sample accession number	CAM_SMPL_002790
Assembly accession number	CAM_ASM_000608
Combined Assembly Name	N/A
Genus	Thalassionema
Species	frauenfeldii
Strain	CCMP 1798
Clonal	Unknown
Axenic	No
Prelim. NCBI Taxon ID	186022
18S rRNA	AGTCATACGCTCGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAATCTTTTACTTTGAAACTGCGAACGGCTCATTATATCAGTTATAATTTATTTGATAGTCCCTTACTACTTGGATAACCGTAGTAATTCTAGAGCTAATACATGCGTCAACACCTTTGGGTGGTATTTATTAGAAAGAAACCAACTCCTTCGGGATGATGTGGTGAATCATAATAAGTTTGCGAATCGCACGGCTTCGTGCTGGCGATGGATCATTCAAGTTTCTGCCCTATCAGCTTTGGATGGTAGGGTATTGGCCTACCATGGCTTTAACGGGTAACGGGAAATTAGGGTTTGATTCCGGAGAGGGAGCCTGAGAGACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCTGACACAGGGAGGTAGTGACAATAAATAACAATGCCGGGCCTTTGTAGGTCTGGCAATTGGAATGAGAACAATTTAAACCCCTTATCGAGGACCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGTTTGAACGAGTCGGTCGCACTATTGTGTGTACATGATTCGTTGGACCATCCTTGGGTGGAATCTGTGTGGCATTAGGTTGTCGTGCAGGGGATGCCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATATATTAGCATGGAATAATAATATAGGACCTTGGTACTATTTTGTTGGTTTGCGCACCGAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTTTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCGAAGATGATTAGATACCATCGTAGTCTTAACCATAAACTATGCCGACAAGGGATTGGCGGTCGTTGTATTGACCCCGTCAGCACCTTATGAGAAATCACAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATGACAGATTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCCCTGCCTGCTAAATAGTTTTGCTAATGATTTTTCATTGGTATCGTAACTTCTTAGAGGGACGTGCGTTCTATTAGACGCAGGAAGATAGGGGCGATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGATGCATGCAACGAGTGTACCTTGGCCGAGAGGCCTGGGAAATCTGTGAACGTGCATCGTGATAGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAACGCAGATCATCAGTCTGCATTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCGGGATTGTGATGAGTTTCCTTTATTGGGGATTTGTCGCGAGAACTTGTCTAAACCTTATCATTAGAG
Importance of organism and transcriptomes
Additional citations and references
Latitude	18.47
Longitude	64.575
Collection date	21-JAN-95
Sample collection site	Caribbean Sea
Other collection site info	Channel between Guana and Tortola, British West Indies
Sample material (e.g. "seawater," "sediment," etc.)	Seawater
Filter fraction minimum (μm)	3
Filter fraction maximum (μm)	10
Volume filtered (L)	4
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Not Applicable
Other environmental metadata available	no other types of environmental metadata available
Other environmental metadata available	no other types of environmental metadata available
Habitat	marine habitat
Country	VIRGIN ISLANDS, BRITISH
Experimental Data
Date of experiment	05-DEC-10
Growth medium	L1+Si
Temperature (ºC)	20
Salinty (psu)	21
pH	8
Light (µmol photons / m2 / sec)	166
Day portion of day:night cycle in hours	16
Night portion of day:night cycle in hours	8
Nitrate (μmol/L)	882
Phosphate (μmol/L)	36.2
Silicate (μmol/L)	106
List of amino acids and concentrations, with units	thiamine, 200 mg; biotin, 10 mL; cyanocobalamin, 1 mL
Trace elements (total) (nmol/L)	24.6634
CO2 (ppm)	447
Investigation type	Eukaryotes