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Thalassionema frauenfeldii CCMP 1798

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Principle Investigator(s) E. Virginia Armbrust
External sample IDThalassionema frauenfeldii
NCGR Sample IDMMETSP0786
Sample accession numberCAM_SMPL_002790
Assembly accession numberCAM_ASM_000608
Combined Assembly NameN/A
GenusThalassionema
Speciesfrauenfeldii
StrainCCMP 1798
ClonalUnknown
AxenicNo
Prelim. NCBI Taxon ID186022
18S rRNA
Importance of organism and transcriptomes
Additional citations and references
Environmental Data
Latitude18.47
Longitude64.575
Collection date21-JAN-95
Sample collection siteCaribbean Sea
Other collection site infoChannel between Guana and Tortola, British West Indies
Sample material (e.g. "seawater," "sediment," etc.)Seawater
Filter fraction minimum (μm)3
Filter fraction maximum (μm)10
Volume filtered (L)4
ENVO term for habitat - primary termAcquatic: marine
ENVO term for habitat - secondary termNot Applicable
Other environmental metadata availableno other types of environmental metadata available
Other environmental metadata availableno other types of environmental metadata available
Habitatmarine habitat
CountryVIRGIN ISLANDS, BRITISH
Experimental Data
Date of experiment05-DEC-10
Growth mediumL1+Si
Temperature (ºC)20
Salinty (psu)21
pH8
Light (µmol photons / m2 / sec)166
Day portion of day:night cycle in hours16
Night portion of day:night cycle in hours8
Nitrate (μmol/L)882
Phosphate (μmol/L)36.2
Silicate (μmol/L)106
List of amino acids and concentrations, with unitsthiamine, 200 mg; biotin, 10 mL; cyanocobalamin, 1 mL
Trace elements (total) (nmol/L)24.6634
CO2 (ppm)447
Investigation typeEukaryotes