Marine Microbial Eukaryote Transcriptome Sequencing Project
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Prasinoderma coloniale CCMP1413
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| Principle Investigator(s) | Alexandra Z. Worden |
|---|---|
| External sample ID | CCMP1413 |
| NCGR Sample ID | MMETSP0806_2 |
| Sample accession number | CAM_SMPL_002831 |
| Assembly accession number | CAM_ASM_000649 |
| Combined Assembly Name | N/A |
| Genus | Prasinoderma |
| Species | coloniale |
| Strain | CCMP1413 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 156133 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Representative of Prasinophyte clade VI |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 35 |
| Longitude | -70 |
| Depth (m) | 150 |
| Collection date | 02-JUL-86 |
| Sample collection site | Atlantic_Ocean |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat | marine habitat |
| Experimental Data | |
| Date of experiment | 23-NOV-10 |
| Growth medium | K-Si artificial sea water |
| Modifications to growth medium | K for all nutrients, except omitted silicate |
| Temperature (ºC) | 21 |
| Salinty (psu) | 35 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Ammonium (μmol/L) | 50 |
| Phosphate (μmol/L) | 10 |
| Trace elements (total) (nmol/L) | 12766 |
| Investigation type | Eukaryotes |