Marine Microbial Eukaryote Transcriptome Sequencing Project
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Picocystis salinarum CCMP1897
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| Principle Investigator(s) | Alexandra Z. Worden |
|---|---|
| External sample ID | CCMP1897 |
| NCGR Sample ID | MMETSP0807_2 |
| Sample accession number | CAM_SMPL_002839 |
| Assembly accession number | CAM_ASM_000657 |
| Combined Assembly Name | Picocystis-salinarum-CCMP1897 |
| Genus | Picocystis |
| Species | salinarum |
| Strain | CCMP1897 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 88271 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Representave of prasinophyte clade VII |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 37.78 |
| Longitude | -122.35 |
| Collection date | 05-DEC-99 |
| Sample collection site | Pacific_Ocean |
| Other collection site info | San Francisco Bay |
| Sample material (e.g. "seawater," "sediment," etc.) | saline pond |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat description | saline pond |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 15-DEC-10 |
| Growth medium | K-Si amended natural seawater (Eastern Pacific) |
| Modifications to growth medium | K for all nutrients except omitted silicate |
| Temperature (ºC) | 6 |
| Salinty (psu) | 35 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 30 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Ammonium (μmol/L) | 50 |
| Phosphate (μmol/L) | 10 |
| Trace elements (total) (nmol/L) | 12766 |
| Investigation type | Eukaryotes |