Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Tetraselmis striata LANL1001
Tetraselmis striata LANL1001
Downloads:
| Principle Investigator(s) | Min Park |
|---|---|
| External sample ID | TetraGrow |
| NCGR Sample ID | MMETSP0817 |
| Sample accession number | CAM_SMPL_002712 |
| Assembly accession number | CAM_ASM_000530 |
| Combined Assembly Name | Tetraselmis-striata-LANL1001 |
| Genus | Tetraselmis |
| Species | striata |
| Strain | LANL1001 |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 3165 |
| 18S rRNA | |
| Importance of organism and transcriptomes | The molecular analysis will provide a knowledge base for the connectivity between lipid and starch synthesis. Dynamic expression of genes important to central metabolism, fatty acid synthesis, starch synthesis, stress response, nutrient transport, and energy cycling will be characterized throughout nitrogen depletion stress. |
| Additional citations and references | |
| Environmental Data | |
| Sample collection site | OTHER |
| ENVO term for habitat - primary term | Acquatic: marine |
| ENVO term for habitat - secondary term | Not Applicable |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 20-MAY-11 |
| Growth medium | f/2 |
| Modifications to growth medium | N03- 10X, P-7X |
| Temperature (ºC) | 30 |
| Salinty (psu) | 38 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 400 |
| Day portion of day:night cycle in hours | 16 |
| Night portion of day:night cycle in hours | 8 |
| Nitrate (μmol/L) | 8820 |
| Phosphate (μmol/L) | 292 |
| Trace elements (total) (nmol/L) | 750 |
| Investigation type | Eukaryotes |