Marine Microbial Eukaryote Transcriptome Sequencing Project
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Thalassiosira weissflogii CCMP1336
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| Principle Investigator(s) | Francois Morel |
|---|---|
| External sample ID | |
| NCGR Sample ID | MMETSP0880 |
| Sample accession number | CAM_SMPL_002832 |
| Assembly accession number | CAM_ASM_000650 |
| Combined Assembly Name | Thalassiosira-weissflogii-CCMP1336 |
| Genus | Thalassiosira |
| Species | weissflogii |
| Strain | CCMP1336 |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 67004 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Marine diatoms are very important primer producers in the ocean and Thalassiosira weissflogii is a model coastal diatom whose physiology and ecology has been intensively studied for decades. Transcriptomic data will allow us to understand how diatoms respond to changes in pCO2 and pH caused by ocean acidification. |
| Additional citations and references | |
| Environmental Data | |
| Experimental Data | |
| Date of experiment | 11-JUN-11 |
| Growth medium | Aquil nutrients amended seawater |
| Modifications to growth medium | Total Fe concentration was 20 nM |
| Temperature (ºC) | 20 |
| Salinty (psu) | 35 |
| pH | 7.8 |
| Light (µmol photons / m2 / sec) | 120 |
| Day portion of day:night cycle in hours | 24 |
| Nitrate (μmol/L) | 100 |
| Phosphate (μmol/L) | 10 |
| Silicate (μmol/L) | 100 |
| Total Fe (nmol/L) | 20 |
| Trace elements (total) (nmol/L) | 350 |
| CO2 (ppm) | 750 |
| Pressure (atm) | 1 |
| Investigation type | Eukaryotes |