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Pelagococcus subviridis CCMP1429

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Principle Investigator(s) Christopher Gobler
External sample IDPelagococcus N-limited
NCGR Sample IDMMETSP0883
Sample accession numberCAM_SMPL_002843
Assembly accession numberCAM_ASM_000661
Combined Assembly NamePelagococcus-subviridis-CCMP1429
GenusPelagococcus
Speciessubviridis
StrainCCMP1429
ClonalUnknown
AxenicNo
Prelim. NCBI Taxon ID35679
18S rRNA
Importance of organism and transcriptomesPelagophytes such as Pelagococcus subviridis represent a common but poorly characterized component of ocean microeukaryotic communities.
Additional citations and references
Environmental Data
Primary citation for organism's characterization, if availableAN ABERRANT CHRYSOPHYCEAN ALGA PELAGOCOCCUS SUBVIRIDIS GEN. NOV. ... FROM THE NORTH PACIFIC OCEAN. Journal of Phycology, 13: 259?266
Latitude49.9166
Longitude-145.1166
Salinity (psu)32.6
Temperature (ºC)6
pH8.1
Collection date01-MAY-72
Collection time12:00 PM
Sample collection sitePacific_Ocean
Other collection site infoCollected along the Great Circle Route traveled by American Mail Line ships from Yokohama to Seattle.
Sample material (e.g. "seawater," "sediment," etc.)seawater
ENVO term for habitat - primary termAcquatic: marine
ENVO term for habitat - secondary termNot Applicable
Habitat descriptionopen ocean mixed layer
Other environmental metadata availableRepresentative data from the location of collection is available
Other environmental metadata availableRepresentative data from the location of collection is available
Habitatmarine habitat
CountryUNITED STATES
Experimental Data
Date of experiment25-SEP-11
Growth mediumGSe media
Modifications to growth mediumAmmonium in place of nitrate
Temperature (ºC)15
Salinty (psu)32
pH7.8
Light (µmol photons / m2 / sec)90
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Ammonium (μmol/L)20
Phosphate (μmol/L)4
Dissolved oxygen (ml/L)8
Total Fe (nmol/L)1100
DOC (mg/L)2
List of amino acids and concentrations, with unitsnone
Trace elements (total) (nmol/L)1004
CO2 (ppm)400
Prey organism, if applicable (genus and species)none
Pressure (atm)1
Investigation typeEukaryotes