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Pelagococcus subviridis CCMP1429
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Principle Investigator(s) | Christopher Gobler |
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External sample ID | Pelagococcus N-limited |
NCGR Sample ID | MMETSP0883 |
Sample accession number | CAM_SMPL_002843 |
Assembly accession number | CAM_ASM_000661 |
Combined Assembly Name | Pelagococcus-subviridis-CCMP1429 |
Genus | Pelagococcus |
Species | subviridis |
Strain | CCMP1429 |
Clonal | Unknown |
Axenic | No |
Prelim. NCBI Taxon ID | 35679 |
18S rRNA | |
Importance of organism and transcriptomes | Pelagophytes such as Pelagococcus subviridis represent a common but poorly characterized component of ocean microeukaryotic communities. |
Additional citations and references | |
Environmental Data | |
Primary citation for organism's characterization, if available | AN ABERRANT CHRYSOPHYCEAN ALGA PELAGOCOCCUS SUBVIRIDIS GEN. NOV. ... FROM THE NORTH PACIFIC OCEAN. Journal of Phycology, 13: 259?266 |
Latitude | 49.9166 |
Longitude | -145.1166 |
Salinity (psu) | 32.6 |
Temperature (ºC) | 6 |
pH | 8.1 |
Collection date | 01-MAY-72 |
Collection time | 12:00 PM |
Sample collection site | Pacific_Ocean |
Other collection site info | Collected along the Great Circle Route traveled by American Mail Line ships from Yokohama to Seattle. |
Sample material (e.g. "seawater," "sediment," etc.) | seawater |
ENVO term for habitat - primary term | Acquatic: marine |
ENVO term for habitat - secondary term | Not Applicable |
Habitat description | open ocean mixed layer |
Other environmental metadata available | Representative data from the location of collection is available |
Other environmental metadata available | Representative data from the location of collection is available |
Habitat | marine habitat |
Country | UNITED STATES |
Experimental Data | |
Date of experiment | 25-SEP-11 |
Growth medium | GSe media |
Modifications to growth medium | Ammonium in place of nitrate |
Temperature (ºC) | 15 |
Salinty (psu) | 32 |
pH | 7.8 |
Light (µmol photons / m2 / sec) | 90 |
Day portion of day:night cycle in hours | 12 |
Night portion of day:night cycle in hours | 12 |
Ammonium (μmol/L) | 20 |
Phosphate (μmol/L) | 4 |
Dissolved oxygen (ml/L) | 8 |
Total Fe (nmol/L) | 1100 |
DOC (mg/L) | 2 |
List of amino acids and concentrations, with units | none |
Trace elements (total) (nmol/L) | 1004 |
CO2 (ppm) | 400 |
Prey organism, if applicable (genus and species) | none |
Pressure (atm) | 1 |
Investigation type | Eukaryotes |