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Pelagomonas calceolata CCMP1756

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Principle Investigator(s) Christopher Gobler
External sample IDPelagomonas light limited
NCGR Sample IDMMETSP0889
Sample accession numberCAM_SMPL_002714
Assembly accession numberCAM_ASM_000532
Combined Assembly NamePelagomonas-calceolata-CCMP1756
GenusPelagomonas
Speciescalceolata
StrainCCMP1756
ClonalUnknown
AxenicNo
Prelim. NCBI Taxon ID35677
18S rRNA
Importance of organism and transcriptomesPelagophytes such as Pelagomonas calceolata represent a common but poorly characterized component of ocean microeukaryotic communities.
Additional citations and references
Environmental Data
Primary citation for organism's characterization, if availableJournal of Phycology, Volume 29, Issue 5, pages 701?715, October 1993ULTRASTRUCTURE AND 18S RRNA GENE SEQUENCE FOR PELAGOMONAS CALCEOLATA GEN. ET SP. NOV. AND THE DESCRIPTION OF A NEW ALGAL CLASS, THE PELAGOPHYCEAE CLASSIS NOV
Latitude30.8333
Longitude-136.8333
Depth (m)5
Salinity (psu)35
Temperature (ºC)25
pH8.1
Collection date17-FEB-73
Collection time12:00 PM
Sample collection sitePacific_Ocean
Sample material (e.g. "seawater," "sediment," etc.)seawater
Chlorophyll (mg/m3)1
ENVO term for habitat - primary termAcquatic: marine
ENVO term for habitat - secondary termNot Applicable
Habitat descriptionopen ocean mixed layer
Other environmental metadata availableRepresentative data from the location of collection is available
Other environmental metadata availableRepresentative data from the location of collection is available
Habitatmarine habitat
CountryUNITED STATES
Experimental Data
Date of experiment19-AUG-11
Growth mediumGSe media
Modifications to growth mediumAmmonium in place of nitrate
Temperature (ºC)22
Salinty (psu)32
pH7.8
Light (µmol photons / m2 / sec)6
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Ammonium (μmol/L)100
Phosphate (μmol/L)4
Dissolved oxygen (ml/L)8
Total Fe (nmol/L)1100
DOC (mg/L)2
List of amino acids and concentrations, with unitsnone
Trace elements (total) (nmol/L)1004
CO2 (ppm)400
Prey organism, if applicable (genus and species)none
Pressure (atm)1
Investigation typeEukaryotes
Other experimental metadata availableCCMP1756 is the axenic version of CCMP1214