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Aureoumbra lagunensis CCMP1510
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Principle Investigator(s) | Christopher Gobler |
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External sample ID | Aureoumbra P-limited |
NCGR Sample ID | MMETSP0892 |
Sample accession number | CAM_SMPL_002720 |
Assembly accession number | CAM_ASM_000538 |
Combined Assembly Name | Aureoumbra-lagunensis-CCMP1510 |
Genus | Aureoumbra |
Species | lagunensis |
Strain | CCMP1510 |
Clonal | Yes |
Axenic | Unknown |
Prelim. NCBI Taxon ID | 44058 |
18S rRNA | |
Importance of organism and transcriptomes | Pelagophytes such as Aureoumbra lagunensis represent a common but poorly characterized component of ocean microeukaryotic communities. In addition, this species is notorious for its ability to form harmful brown tides in US Gulf Coast estuaries. |
Additional citations and references | Gobler, C.J., and Sunda, W.G. 2006. Brown tides. In: Graneli, Turner, J.T. (eds), The Ecology of Harmful Algae, Springer-Verlag, pages 111-123 |
Environmental Data | |
Primary citation for organism's characterization, if available | DeYoe, H.R., Stockwell, D.A., Bidigare, R.R., Latasa, M., Johnson, P.W., Hargraves, P.E., Suttle, C.A., 1997. Description and characterization of the algal species Aureoumbra lagunensis gen. et sp. nov. and referral of Aureoumbra and Aureococcus to the Pelagophyceae. J. Phycol. 33, 1042-1048. |
Latitude | 27.4708 |
Longitude | -97.32 |
Depth (m) | 1 |
Salinity (psu) | 40 |
Temperature (ºC) | 30 |
pH | 8 |
Collection date | 01-JAN-92 |
Collection time | 12:00 PM |
Sample collection site | OTHER |
Other collection site info | Bird Island Station, Laguna Madre, Texas USA |
Sample material (e.g. "seawater," "sediment," etc.) | seawater |
ENVO term for habitat - primary term | Aquatic: marine |
ENVO term for habitat - secondary term | Not Applicable |
Habitat description | Estuarine |
Other environmental metadata available | None |
Other environmental metadata available | None |
Habitat | marine habitat |
Country | UNITED STATES |
Experimental Data | |
Date of experiment | 01-AUG-11 |
Growth medium | GSe media |
Modifications to growth medium | Ammonium in place of nitrate |
Temperature (ºC) | 22 |
Salinty (psu) | 32 |
pH | 7.8 |
Light (µmol photons / m2 / sec) | 100 |
Day portion of day:night cycle in hours | 12 |
Night portion of day:night cycle in hours | 12 |
Ammonium (μmol/L) | 100 |
Phosphate (μmol/L) | .5 |
Dissolved oxygen (ml/L) | 8 |
Total Fe (nmol/L) | 1100 |
DOC (mg/L) | 2 |
List of amino acids and concentrations, with units | none |
Trace elements (total) (nmol/L) | 1004 |
CO2 (ppm) | 400 |
Prey organism, if applicable (genus and species) | none |
Pressure (atm) | 1 |
Investigation type | Eukaryotes |
Other experimental metadata available | CCMP1509 is the axenic version of CCMP1510 |