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Aureoumbra lagunensis CCMP1510

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Principle Investigator(s) Christopher Gobler
External sample IDAureoumbra light limited
NCGR Sample IDMMETSP0893
Sample accession numberCAM_SMPL_002721
Assembly accession numberCAM_ASM_000539
Combined Assembly NameAureoumbra-lagunensis-CCMP1510
GenusAureoumbra
Specieslagunensis
StrainCCMP1510
ClonalYes
AxenicUnknown
Prelim. NCBI Taxon ID44058
18S rRNA
Importance of organism and transcriptomesPelagophytes such as Aureoumbra lagunensis represent a common but poorly characterized component of ocean microeukaryotic communities. In addition, this species is notorious for its ability to form harmful brown tides in US Gulf Coast estuaries.
Additional citations and referencesGobler, C.J., and Sunda, W.G. 2006. Brown tides. In: Graneli, Turner, J.T. (eds), The Ecology of Harmful Algae, Springer-Verlag, pages 111-123
Environmental Data
Primary citation for organism's characterization, if availableDeYoe, H.R., Stockwell, D.A., Bidigare, R.R., Latasa, M., Johnson, P.W., Hargraves, P.E., Suttle, C.A., 1997. Description and characterization of the algal species Aureoumbra lagunensis gen. et sp. nov. and referral of Aureoumbra and Aureococcus to the Pelagophyceae. J. Phycol. 33, 1042-1048.
Latitude27.4708
Longitude-97.32
Depth (m)1
Salinity (psu)40
Temperature (ºC)30
pH8
Collection date01-JAN-92
Collection time12:00 PM
Sample collection siteOTHER
Other collection site infoBird Island Station, Laguna Madre, Texas USA
Sample material (e.g. "seawater," "sediment," etc.)seawater
ENVO term for habitat - primary termAquatic: marine
ENVO term for habitat - secondary termNot Applicable
Habitat descriptionEstuarine
Other environmental metadata availableNone
Other environmental metadata availableNone
Habitatmarine habitat
CountryUNITED STATES
Experimental Data
Date of experiment01-AUG-11
Growth mediumGSe media
Modifications to growth mediumAmmonium in place of nitrate
Temperature (ºC)22
Salinty (psu)32
pH7.8
Light (µmol photons / m2 / sec)7
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Ammonium (μmol/L)100
Phosphate (μmol/L)5
Dissolved oxygen (ml/L)8
Total Fe (nmol/L)1100
DOC (mg/L)2
List of amino acids and concentrations, with unitsnone
Trace elements (total) (nmol/L)1004
CO2 (ppm)400
Prey organism, if applicable (genus and species)none
Pressure (atm)1
Investigation typeEukaryotes
Other experimental metadata availableCCMP1509 is the axenic version of CCMP1510