Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Aureococcus anophagefferens CCMP1850
Aureococcus anophagefferens CCMP1850
Downloads:
| Principle Investigator(s) | Christopher Gobler |
|---|---|
| External sample ID | Aureococcus replete |
| NCGR Sample ID | MMETSP0917 |
| Sample accession number | CAM_SMPL_002768 |
| Assembly accession number | CAM_ASM_000586 |
| Combined Assembly Name | Aureococcus-anophagefferens-CCMP1850 |
| Genus | Aureococcus |
| Species | anophagefferens |
| Strain | CCMP1850 |
| Clonal | Yes |
| Axenic | Yes |
| Prelim. NCBI Taxon ID | 44056 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Pelagophytes such as Aureococcus anophagefferens represent a common but poorly characterized component of ocean microeukaryotic communities. In addition, this species is notorious for its ability to form harmful brown tides in US east coast estuaries. |
| Additional citations and references | Gobler, C.J., Lonsdale, D.J., Boyer, G.L. 2005. A synthesis and review of causes and impact of harmful brown tide blooms caused by the alga, Aureococcus anophagefferens. Estuaries 28: 726-749 |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Sieburth, J.M., Johnson, P.W. & Hargraves, P.E. (1988). Ultrastructure and ecology of Aureococcus anophagefferens gen et sp. nov. (Chrysophyceae): the dominant picoplankter during a bloom in Narragansett Bay, Rhode Island, summer 1985. Journal of Phycology 24: 416-425. |
| Latitude | 40.6508 |
| Longitude | -73.1524 |
| Depth (m) | 1 |
| Salinity (psu) | 25.25 |
| Temperature (ºC) | 18 |
| pH | 8 |
| Collection date | 06-MAY-98 |
| Collection time | 12:00 PM |
| Sample collection site | OTHER |
| Other collection site info | Great South Bay, NY, Suffolk County monitoring station #300 |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| Chlorophyll (mg/m3) | 14 |
| Nirate (μmol/kg) | 0.35 |
| Phosphate (μmol/kg) | 0.16 |
| Dissolved oxygen (ml/L) | 9.9 |
| DOC (mg/L) | 3.07 |
| POC (mg/L) | 1.23 |
| Silicate (μmol/kg) | 1 |
| ENVO term for habitat - primary term | Aquatic: marine |
| ENVO term for habitat - secondary term | Not Applicable |
| Habitat description | Estuarine |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 20-NOV-11 |
| Growth medium | GSe media |
| Modifications to growth medium | Ammonium in place of nitrate |
| Temperature (ºC) | 22 |
| Salinty (psu) | 32 |
| pH | 7.8 |
| Light (µmol photons / m2 / sec) | 12 |
| Day portion of day:night cycle in hours | 12 |
| Night portion of day:night cycle in hours | 12 |
| Ammonium (μmol/L) | 80 |
| Phosphate (μmol/L) | 5 |
| Dissolved oxygen (ml/L) | 8 |
| Total Fe (nmol/L) | 1100 |
| DOC (mg/L) | 2 |
| List of amino acids and concentrations, with units | none |
| Trace elements (total) (nmol/L) | 1004 |
| CO2 (ppm) | 400 |
| Prey organism, if applicable (genus and species) | none |
| Pressure (atm) | 1 |
| Investigation type | Eukaryotes |