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Skeletonema marinoi skelA

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Principle Investigator(s) Tatiana Rynearson
External sample IDSkelA-SiLim
NCGR Sample IDMMETSP0920
Sample accession numberCAM_SMPL_003110
Assembly accession numberCAM_ASM_000828
Combined Assembly NameSkeletonema-marinoi-SkelA
GenusSkeletonema
Speciesmarinoi
StrainskelA
ClonalYes
AxenicNo
Prelim. NCBI Taxon ID267567
18S rRNA
Importance of organism and transcriptomes
Additional citations and referencesBorkman, D. G. and T. Smayda (2009). "Multidecadal (1959-1997) changes in Skeletonema abundance and seasonal bloom patterns in Narragansett Bay, Rhode Island, USA." Journal of Sea Research 61(1-2): 84-94; Kooistra, W. H. C. F., D. Sarno, S. Balzano, H. Gu, R. A. Andersen and A. Zingone (2008). "Global Diversity and Biogeography of Skeletonema Species (Bacillariophyta)." Protist 159(2): 177-193.
Environmental Data
Primary citation for organism's characterization, if availableSarno, D., W. H. C. Kooistra, L. K. Medlin, I. Percopo, and A. Zingone. 2005. Diversity in the genus Skeletonema (Bacillariophyceae). II. An assessment of the taxonomy of S. costatum-like species with the description of four new species. J Phycol 41:151-176.
Latitude41.573611
Longitude-71.408611
Depth (m).5
Salinity (psu)31.38
Temperature (ºC)6.1
Collection date22-NOV-10
Collection time10:00 AM
Sample collection siteAtlantic_Ocean
Other collection site infoNarragansett Bay Long Term Plankton Times Series Station
Sample material (e.g. "seawater," "sediment," etc.)Seawater
ENVO term for habitat - primary termAcquatic: marine
Habitat descriptionestuary
Habitatmarine habitat
CountryUNITED STATES
Experimental Data
Date of experiment23-MAR-12
Growth mediumf/2 amended Sargasso seawater
Modifications to growth mediumf/2 for all nutrients except no Si added
Temperature (ºC)14
Salinty (psu)36
pH7.9
Light (µmol photons / m2 / sec)180
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Nitrate (μmol/L)882
Phosphate (μmol/L).6
Investigation typeEukaryotes
Other experimental metadata availableaxenic