Ostreococcus mediterraneus clade-D-RCC2572

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Environmental Data
Principle Investigator(s)	Gwenael Piganeau
External sample ID	BCC35000
NCGR Sample ID	MMETSP0929
Sample accession number	CAM_SMPL_002755
Assembly accession number	CAM_ASM_000573
Combined Assembly Name	N/A
Genus	Ostreococcus
Species	mediterraneus
Strain	clade-D-RCC2572
Clonal	Yes
Axenic	Yes
Prelim. NCBI Taxon ID	548131
18S rRNA	TGCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAGCGTTTATACTGTGAAACTGCGAATGGCTCATTAAATCAGCAATAGTTTCTTTGGTGGTGTTTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCGTAAATCCCGACTTCGGAAGGGACGTATTTATTAGATAAAGACCGACCTCGTTCTGCGGTGAATCATAATAACTTTACGGATCGTTCGCTTCGGCGGCGATGTTCCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACAGGGAGGTAGTGACAATAAATAACAATACCGGGCTTTTTCAAGTCTGGTAATTGGAATGAGAACAATTTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTCGGACTTTGGCTGAGAACGGTCGGTCCGCCGTTAGGTGTGCACTGACTGGTCTCAGCTTCCTGGTGAGGACGCGCTCCTCACGGACGCGGAGTCACCGTGGTTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATATTAGCATGGAATAACACCATAGGACTCCTGTCCTATTTCGTTGGTCTCGGGACGGGAGTAATGATTAAGAGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTGGGGGCTCGAAGATGATTAGATACCATCCTAGTCTCAACCATAAACGATGCCGACTAGGGATTGGCGGATGTTAATTGATGACTTCGCCAGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGCGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGATTGATAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAATAGTTGGACCCTACTCTTAGGGCCACAACTTCTTAGAGGGACTATGTGCGTGTAGCACGTGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGAATTCAACGAGCTTATAACCTTGGCCGAAAGGTCTGGGTAATCTCCAAAATTCGTCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTTGGACTATGGTTTTCTGATGGTCCGCCGTTGGATTACCGTGGGAAGTTCGTTAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACC
Importance of organism and transcriptomes	Most prevalent Ostreococcus in Lion Gulf (Mediterranean sea)
Additional citations and references
Primary citation for organism's characterization, if available	, Subirana et al. In preparation
Latitude	3.145
Longitude	42.488
Temperature (ºC)	15
pH	8
Collection date	04-JUN-03
Sample collection site	Mediterranean Sea
Sample material (e.g. "seawater," "sediment," etc.)	seawater
Filter fraction maximum (μm)	1.2
Volume filtered (L)	.02
ENVO term for habitat - primary term	Acquatic: marine
ENVO term for habitat - secondary term	Not Applicable
Habitat description	Mediterranean sea
Other environmental metadata available	no other types of environmental metadata available
Other environmental metadata available	no other types of environmental metadata available
Habitat	marine habitat
Country	FRANCE
Experimental Data
Date of experiment	16-OCT-11
Growth medium	L1 amended no Si ? see https://ccmp.bigelow.org/node/83
Modifications to growth medium	No silicate
Temperature (ºC)	20
Salinty (psu)	35
pH	8.1
Light (µmol photons / m2 / sec)	100
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Nitrate (μmol/L)	.882
Phosphate (μmol/L)	.032
Total Fe (nmol/L)	11700
List of amino acids and concentrations, with units	none
Trace elements (total) (nmol/L)	3807.6
Pressure (atm)	1
Investigation type	Eukaryotes