Home :: List of Publicly Available Datasets :: Ostreococcus mediterraneus clade-D-RCC2572

Ostreococcus mediterraneus clade-D-RCC2572

Downloads:


Principle Investigator(s) Gwenael Piganeau
External sample IDBCC35000
NCGR Sample IDMMETSP0929
Sample accession numberCAM_SMPL_002755
Assembly accession numberCAM_ASM_000573
Combined Assembly NameN/A
GenusOstreococcus
Speciesmediterraneus
Strainclade-D-RCC2572
ClonalYes
AxenicYes
Prelim. NCBI Taxon ID548131
18S rRNA
Importance of organism and transcriptomesMost prevalent Ostreococcus in Lion Gulf (Mediterranean sea)
Additional citations and references
Environmental Data
Primary citation for organism's characterization, if available, Subirana et al. In preparation
Latitude3.145
Longitude42.488
Temperature (ºC)15
pH8
Collection date04-JUN-03
Sample collection siteMediterranean Sea
Sample material (e.g. "seawater," "sediment," etc.)seawater
Filter fraction maximum (μm)1.2
Volume filtered (L).02
ENVO term for habitat - primary termAcquatic: marine
ENVO term for habitat - secondary termNot Applicable
Habitat descriptionMediterranean sea
Other environmental metadata availableno other types of environmental metadata available
Other environmental metadata availableno other types of environmental metadata available
Habitatmarine habitat
CountryFRANCE
Experimental Data
Date of experiment16-OCT-11
Growth mediumL1 amended no Si ? see https://ccmp.bigelow.org/node/83
Modifications to growth mediumNo silicate
Temperature (ºC)20
Salinty (psu)35
pH8.1
Light (µmol photons / m2 / sec)100
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Nitrate (μmol/L).882
Phosphate (μmol/L).032
Total Fe (nmol/L)11700
List of amino acids and concentrations, with unitsnone
Trace elements (total) (nmol/L)3807.6
Pressure (atm)1
Investigation typeEukaryotes