Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Cafeteria roenbergensis E4-10
Cafeteria roenbergensis E4-10
Downloads:
| Principle Investigator(s) | Alastair Simpson |
|---|---|
| External sample ID | CafeteriaE4-10 |
| NCGR Sample ID | MMETSP0942 |
| Sample accession number | CAM_SMPL_002772 |
| Assembly accession number | CAM_ASM_000590 |
| Combined Assembly Name | N/A |
| Genus | Cafeteria |
| Species | roenbergensis |
| Strain | E4-10 |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 33653 |
| 18S rRNA | |
| Importance of organism and transcriptomes | ############################################################################################################################################################################################################################################################### |
| Additional citations and references | PMID: 20974979 |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Gonzalez JM & Suttle CA (1993) Grazing by marine nanoflagellates on viruses and virus-sized particles: Ingestion and digestion. Mar Ecol Prog Ser 94:1?10. |
| Latitude | 44.7 |
| Longitude | -124.2 |
| Depth (m) | 60 |
| Collection date | 01-APR-90 |
| Sample collection site | Pacific_Ocean |
| Other collection site info | station NH5 |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Aquatic: marine |
| Habitat description | Coastal (5km from shore); photic zone |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 31-MAY-11 |
| Growth medium | artificial seawater: NaCl (24.72 g/L), KCl (6.7 g/L), CaCl2 (1.03 g/L), MgCl2 (2.18 g/L), MgSO4 (3.07 g/L), NaHCO3 (0.18 g/L) |
| Temperature (ºC) | 22 |
| Salinty (psu) | 32 |
| pH | 8.4 |
| Prey organism, if applicable (genus and species) | Enterobacter aerogenes |
| Investigation type | Eukaryotes |