Marine Microbial Eukaryote Transcriptome Sequencing Project
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Chattonella subsalsa CCMP2191
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| Principle Investigator(s) | Kathryn Coyne |
|---|---|
| External sample ID | Chattonella subsalsa |
| NCGR Sample ID | MMETSP0949 |
| Sample accession number | CAM_SMPL_002668 |
| Assembly accession number | CAM_ASM_000486 |
| Combined Assembly Name | Chattonella-subsalsa-CCMP2191 |
| Genus | Chattonella |
| Species | subsalsa |
| Strain | CCMP2191 |
| Clonal | No |
| Axenic | No |
| Prelim. NCBI Taxon ID | 44440 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Chattonella subsalsa is a globally distributed harmful algal species, causing massive fish kills in coastal environments worldwide. This sequencing project will provide information about transcriptional regulation of nitrogen and carbon assimilation in Chattonella subsalsa, and ultimately enhance the development of ecological models of harmful algal blooms. |
| Additional citations and references | PMID:17609846; |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Biecheler B. 1936. Sur une chloromonadine nouvelle d?eau saumatre Chattonella subsalsa n. gen., n. sp. Arch. Zool. Exp. Gen. 78: 79-83 |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 02-AUG-11 |
| Growth medium | ESAW medium |
| Modifications to growth medium | nitrogen source added at 100 uM concentrations |
| Temperature (ºC) | 25 |
| Salinty (psu) | 20 |
| pH | 8 |
| Light (µmol photons / m2 / sec) | 50 |
| Day portion of day:night cycle in hours | 12 |
| Night portion of day:night cycle in hours | 12 |
| Nitrate (μmol/L) | 100 |
| Phosphate (μmol/L) | 22 |
| Trace elements (total) (nmol/L) | 850 |
| Investigation type | Eukaryotes |