Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: non described non described CCMP2098
non described non described CCMP2098
Downloads:
| Principle Investigator(s) | Connie Lovejoy |
|---|---|
| External sample ID | ArcticPedinales DON |
| NCGR Sample ID | MMETSP0991 |
| Sample accession number | CAM_SMPL_002683 |
| Assembly accession number | CAM_ASM_000501 |
| Combined Assembly Name | Undescribed-sp-CCMP2098 |
| Genus | non described |
| Species | non described |
| Strain | CCMP2098 |
| Clonal | Unknown |
| Axenic | Yes |
| Prelim. NCBI Taxon ID | 483369 |
| 18S rRNA | |
| Importance of organism and transcriptomes | This Dictyochophyceae is one of the most striking specie in arctic water column and additional transcriptomes will provide information on the potential of mixotrophs in a changing Arctic Ocean as this genus is phototrophic and phagotrophic |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 76.285 |
| Longitude | -73.0575 |
| Depth (m) | 75 |
| Collection date | 20-JUN-98 |
| Sample collection site | Northern Baffin Bay |
| Other collection site info | North Water Polynya Study (NOW) |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Acquatic: marine |
| ENVO term for habitat - secondary term | Other |
| Habitat description | Arctic Sea Water |
| Habitat | marine habitat |
| Country | CANADA |
| Experimental Data | |
| Date of experiment | 31-AUG-11 |
| Growth medium | L1 amended sea water |
| Modifications to growth medium | antibiotics final concentrations: penicilin 25mg/L; neomycin 20 mg/L; kanamycin 20 mg/L: nitrate replaced by urea |
| Temperature (ºC) | 6 |
| Salinty (psu) | 36 |
| pH | 8.3 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 24 |
| Phosphate (μmol/L) | 36 |
| Silicate (μmol/L) | 106 |
| Trace elements (total) (nmol/L) | 24571 |
| Urea (μmol/L) | 441 |
| Investigation type | Eukaryotes |