Marine Microbial Eukaryote Transcriptome Sequencing Project
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Pycnococcus sp CCMP1998
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| Principle Investigator(s) | Alexandra Z. Worden |
|---|---|
| External sample ID | CCMP1998 |
| NCGR Sample ID | MMETSP1085 |
| Sample accession number | CAM_SMPL_003089 |
| Assembly accession number | CAM_ASM_000807 |
| Combined Assembly Name | N/A |
| Genus | Pycnococcus |
| Species | sp |
| Strain | CCMP1998 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 41879 |
| 18S rRNA | |
| Importance of organism and transcriptomes | prasinophyte clade V |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 20.7722 |
| Longitude | -63.0368 |
| Depth (m) | 125 |
| Collection date | 31-AUG-98 |
| Sample collection site | Sargasso Sea |
| Other collection site info | North Atlantic |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat description | oceanic |
| Habitat | marine habitat |
| Country | BERMUDA |
| Experimental Data | |
| Date of experiment | 09-DEC-11 |
| Growth medium | f/2 amended seawater |
| Modifications to growth medium | silicate omitted |
| Temperature (ºC) | 21 |
| Salinty (psu) | 35 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36 |
| Trace elements (total) (nmol/L) | 12795 |
| Investigation type | Eukaryotes |