Pseudopedinella elastica CCMP716

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Environmental Data
Principle Investigator(s)	David Caron
External sample ID	P.elastica
NCGR Sample ID	MMETSP1097
Sample accession number	CAM_SMPL_002636
Assembly accession number	CAM_ASM_000454
Combined Assembly Name	Pseudopedinella-elastica-CCMP716
Genus	Pseudopedinella
Species	elastica
Strain	CCMP716
Clonal	Unknown
Axenic	No
Prelim. NCBI Taxon ID	35684
18S rRNA	AACCTGGTTGATCCTGCCAGTAGTCATACGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACGACTCTATAC TGTGAAACTGCGTACGGCTCATTAAACCAGTTATAGTTTATTTGATATTCCCCTACTACTCGGATACCCGTAGTAATTCT AGAGCTAATACGTGCGTCAAACGACATTTGTCGTGTCATTATTAGATAGAAACCAATGCGGCTTCGGCCGGTATTGTGGT GAGTCATGATAATTTAGCGGATCGCATGGTCTCGTACCGGCGATGGATCATTCAAGTTTCTGCCCTATCAGCTTTGGATG GTAGGGTATTGGCCTACCATGGCTTTAACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGACGGC TACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCTGACACAGGGAGGTAGTGACAAAAAATAACTTAGTC GGGCCGTTTTCGGTCTGACTTTAGGAATGAGAACAATTTAAATCCCTTATCGAGGATCAATTGGAGGGCAAGTCTGGTGC CAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCTGGAT TGAGCGGCTGGCCTTGCGCGCAAGCGTTCGTGTCGGCTTCGTTTCGGTCCATCCTCAGGGGGACTTGCGCTGGCATTAAC GTGTCGGTGTTGGGACGCCTGTCGTTTACTGTGAACAAATTAGAGTGTTCAAAGCAAGGTGTACTTGAATACATTAGCAT GGAATAATAAGATAGGACTTTGGTGGTTCTTTTTGATATTTTGTTGGTTTGCACGCCAAAGTAATGATTAATAGGAGCAG TTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATAGAAGACGAACTACTGCGAAAGCATTTACCAA GGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCGAAGAAGATTAGATACCTTCGTAGTCCTAACCATAAACTATG CCGACTCGGGATTGGCGGTCGTTTTTTTACCGACTCCGTCAGCACCGTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGG AGTATGGTCGCAAGGCTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTC AACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGATTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGT GCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCCCCGCCTGCTAAATAGTGC TGGGAATGCTTCGCATTGCCAGATCGCTTCTTAGAGGGACTTCGTGTGACTAACACGAGGAAGTTGGGGGCAATAACAGG TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATGCAACGAGTTTACAACCTTGGCCGGGAGG CCTGGGTAATCTGTGAACGTGCATCGTGATAGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAA CGCAAGTCAACAGCTTGCATTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCACCTACCGATCGAAGGTAATGA TGAGCCCTCAGGACAGTCGATTGGCGCCTTCACGGGTACCTTTTGGTTGAAATTTGTGCAAATCCTTACCTTTAGAGGAA GGTGAAGTCGTAACAAGGTTACCGTAGGTGAACCTGCAGAAGGATC
Importance of organism and transcriptomes	This second set of 15 sample submissions includes mixotrophic protists and related heterotrophs from a wide diversity of taxa. We hope looking at these transcriptomes will shed light on evolutionary and ecological adaptation of single celled eukaryotes. Pseudopedinella is a mixotrophic Chrysophyte.
Additional citations and references	Caron, D.A. 2000. Symbiosis and mixotrophy among pelagic microorganisms. In: Kirchman, D.L. (Ed.), Microbial ecology of the oceans, John Wiley & Sons, Inc., New York, pp. 495-523.
Latitude	43
Longitude	-68
Depth (m)	1
Salinity (psu)	36
Temperature (ºC)	18
Collection date	30-SEP-88
Sample collection site	Gulf of Maine
Sample material (e.g. "seawater," "sediment," etc.)	Seawater
Habitat	marine habitat
Country	UNITED STATES
Experimental Data
Date of experiment	19-DEC-11
Growth medium	Marine Media K
Modifications to growth medium	No silica
Temperature (ºC)	18
Salinty (psu)	36
pH	8
Light (µmol photons / m2 / sec)	300
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Investigation type	Eukaryotes