Marine Microbial Eukaryote Transcriptome Sequencing Project
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Rhodomonas abbreviata Caron Lab Isolate
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| Principle Investigator(s) | David Caron |
|---|---|
| External sample ID | R.abbreviata |
| NCGR Sample ID | MMETSP1101 |
| Sample accession number | CAM_SMPL_003093 |
| Assembly accession number | CAM_ASM_000811 |
| Combined Assembly Name | N/A |
| Genus | Rhodomonas |
| Species | abbreviata |
| Strain | Caron Lab Isolate |
| Clonal | Yes |
| Axenic | No |
| Prelim. NCBI Taxon ID | 46948 |
| 18S rRNA | |
| Importance of organism and transcriptomes | This second set of 15 sample submissions includes mixotrophic protists and related heterotrophs from a wide diversity of taxa. We hope looking at these transcriptomes will shed light on evolutionary and ecological adaptation of single celled eukaryotes. Cryptophytes are presumed to be mixotrophic. |
| Additional citations and references | Caron, D.A. 2000. Symbiosis and mixotrophy among pelagic microorganisms. In: Kirchman, D.L. (Ed.), Microbial ecology of the oceans, John Wiley & Sons, Inc., New York, pp. 495-523 |
| Environmental Data | |
| Collection date | 01-JUN-06 |
| Sample collection site | Southern California |
| Sample material (e.g. "seawater," "sediment," etc.) | Seawater |
| Habitat | marine habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 18-OCT-11 |
| Growth medium | Marine Media K |
| Modifications to growth medium | Soil extract |
| Temperature (ºC) | 18 |
| Salinty (psu) | 36 |
| pH | 8 |
| Light (µmol photons / m2 / sec) | 300 |
| Day portion of day:night cycle in hours | 12 |
| Night portion of day:night cycle in hours | 12 |
| Investigation type | Eukaryotes |