Ochromonas sp. BG-1

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Environmental Data
Principle Investigator(s)	David Caron
External sample ID	OchroBG1
NCGR Sample ID	MMETSP1105
Sample accession number	CAM_SMPL_003097
Assembly accession number	CAM_ASM_000815
Combined Assembly Name	N/A
Genus	Ochromonas
Species	sp.
Strain	BG-1
Clonal	Unknown
Axenic	No
Prelim. NCBI Taxon ID	2985
18S rRNA	AACCTGGTTGATCCTGCCAGTAGCATACGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACAACTTTATACG TGAAACTGCGAATGGCTCATTATATCAGTTATAGTTTATTTGATGGTCATTGCTACTTGGATAACCGTAGTAATTCTAGA GCTAATACATGCATAAAACCCTGACTTCTGGAAAGGGTGTACTTATTAGATGGAAACCAATGCGGGGCAACCCGGATACT GGTGATTCATAATAATTTTCGGATCGATCGTAGGATCGATGCATCATTCAAGTTTCTGCCCTATCAGCTTTGGATGGTAG GGTATTGGCCTACCATGGCATTAACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACC ACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCTGACACAGGGAGGTAGTGACAATAAATAACAATGTCGGGC TTTTCTAAGTCTGACAATTGGAATGAGAACAATTTAAATCCCTTATCGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGC AGCCGCGGTAATTCCAGCTCCAATAGCGTATACTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTCTCGA GACGCGGCCAGCCTCAAGGGGCGATGCTGTGGATCGGGACCATCCTCGAGGAGAACATATCTGTCATTGAGTTGATGGGT ATGGGACCCTCGTCATTTACTGTGAGCAAAATAGAGTGTTCAAAGCAGGCTTACGCCGTTGAATACATTAGCATGGAATA ATAAGATAGGACCTTGGTCTATTTTGTTGGTTATACTCCGAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTC AATTGTCAGAGGTGAAATTCTTGGATTTATGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA AGAACGAAAGTTAGGGGATCGAAGATGATTAGATACCATCGTAGTCTTAACCATAAACTATGCCGACTAGGGATTGGTGG GTGTTATTAGCGACTCCATCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAA ACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAG GTCCAGACATAGTGAGGATTGACAGATTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGG TGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCCCCACCTGCTAACTAGTCGCCTTAATGCCTAGCATTGAG GTGTACTTCTTAGAGGGACTTTCGGTGATTAATCGAAGGAAGTTGGGGGCAATAACAGGTCTGTGATGCCCTTAGATGTC CTGGGCCGCACGCGCGCTACACTGACACACGCAGCGAGTTTTCCTTGTCCGAAAGGTCTGGGTAATCTTGTAAATGTGTG TCGTGATAGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAATGCGGGTCATCAGCTCGCGTTGA TTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCACCTACCGATTGGATGATTCGGTGAAACTTTCGGACTGTGATCAA GACGCTCTCGGGCGACTCGGTCGCGGGAAGTTATTTAAACCTCATCATCTAGAGGAAGGTGAAGTCGTAACAAGGTTTCC GTAGGTGAACCTGCAGAAGGATC
Importance of organism and transcriptomes	This second set of 15 sample submissions includes mixotrophic protists and related heterotrophs from a wide diversity of taxa. We hope looking at these transcriptomes will shed light on evolutionary and ecological adaptation of single celled eukaryotes. Ochromonas is a mixotrophic Chrysophyte.
Additional citations and references	Caron, D.A. 2000. Symbiosis and mixotrophy among pelagic microorganisms. In: Kirchman, D.L. (Ed.), Microbial ecology of the oceans, John Wiley & Sons, Inc., New York, pp. 495-523.
Collection date	01-JAN-97
Sample material (e.g. "seawater," "sediment," etc.)	freshwater
Habitat	freshwater habitat
Country	MALAYSIA
Experimental Data
Date of experiment	30-JAN-12
Growth medium	DY-V
Modifications to growth medium	0.001% Yeast extract and Rice grains
Temperature (ºC)	18
pH	8
Light (µmol photons / m2 / sec)	300
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Investigation type	Eukaryotes